Cluster: MGYG000004697_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004697
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_20 | MGYG000004697_20_25 | 30543 | 31922 | + | 2.A.66.1.32 |
| pfam | MGYG000004697_20 | MGYG000004697_20_26 | 31933 | 33681 | + | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| STP | MGYG000004697_20 | MGYG000004697_20_27 | 33725 | 36145 | + | B12-binding | B12-binding_2 |
| CAZyme | MGYG000004697_20 | MGYG000004697_20_28 | 36164 | 37111 | + | GT2 |
| CAZyme | MGYG000004697_20 | MGYG000004697_20_29 | 37114 | 38031 | + | GT2 |
Gene ID: MGYG000004697_20_25
Type: TC
Location: 30543 - 31922 (+)
Type: TC
Location: 30543 - 31922 (+)
Gene ID: MGYG000004697_20_26
Type: pfam
Location: 31933 - 33681 (+)
Type: pfam
Location: 31933 - 33681 (+)
Gene ID: MGYG000004697_20_27
Type: STP
Location: 33725 - 36145 (+)
Type: STP
Location: 33725 - 36145 (+)
Gene ID: MGYG000004697_20_28
Type: CAZyme
Location: 36164 - 37111 (+)
Type: CAZyme
Location: 36164 - 37111 (+)
Gene ID: MGYG000004697_20_29
Type: CAZyme
Location: 37114 - 38031 (+)
Type: CAZyme
Location: 37114 - 38031 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_20_25 | vegetarian > omnivore | 1.37633 | 0.01067 |
| MGYG000004697_20_25 | vegetarian > vegan | 1.08252 | 0.00305 |
| MGYG000004697_20_29 | vegetarian > omnivore | 2.58619 | 0.01067 |
| MGYG000004697_20_29 | vegetarian > vegan | 1.69586 | 0.00305 |