Cluster: MGYG000004697_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_10829
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_19 | MGYG000004697_19_40 | 41695 | 43026 | - | 1.B.52.2.2 |
| pfam | MGYG000004697_19 | MGYG000004697_19_41 | 43196 | 45136 | + | DUF2207 | DUF2207_C |
| pfam | MGYG000004697_19 | MGYG000004697_19_42 | 45421 | 46275 | - | QRPTase_C | QRPTase_N |
| TC | MGYG000004697_19 | MGYG000004697_19_43 | 46272 | 47597 | - | 3.D.10.1.4 |
| CAZyme | MGYG000004697_19 | MGYG000004697_19_44 | 47715 | 48902 | - | GH10 |
Gene ID: MGYG000004697_19_40
Type: TC
Location: 41695 - 43026 (-)
Type: TC
Location: 41695 - 43026 (-)
Gene ID: MGYG000004697_19_41
Type: pfam
Location: 43196 - 45136 (+)
Type: pfam
Location: 43196 - 45136 (+)
Gene ID: MGYG000004697_19_42
Type: pfam
Location: 45421 - 46275 (-)
Type: pfam
Location: 45421 - 46275 (-)
Gene ID: MGYG000004697_19_43
Type: TC
Location: 46272 - 47597 (-)
Type: TC
Location: 46272 - 47597 (-)
Gene ID: MGYG000004697_19_44
Type: CAZyme
Location: 47715 - 48902 (-)
Type: CAZyme
Location: 47715 - 48902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_19_40 | vegetarian > omnivore | 1.14075 | 0.01067 |
| MGYG000004697_19_40 | vegetarian > vegan | 1.98604 | 0.00305 |