Cluster: MGYG000004697_CGC2
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004697
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004697_3 | MGYG000004697_3_39 | 38613 | 40073 | + | GT4 |
| pfam | MGYG000004697_3 | MGYG000004697_3_40 | 40098 | 41543 | + | PelG |
| pfam | MGYG000004697_3 | MGYG000004697_3_41 | 41564 | 41950 | + | DUF2304 |
| CAZyme | MGYG000004697_3 | MGYG000004697_3_42 | 41947 | 43161 | + | GT4 |
| CAZyme | MGYG000004697_3 | MGYG000004697_3_43 | 43164 | 43946 | + | GT2 |
| pfam | MGYG000004697_3 | MGYG000004697_3_44 | 43936 | 45174 | + | DUF4832 | DUF4874 |
| pfam | MGYG000004697_3 | MGYG000004697_3_45 | 45171 | 46589 | - | DUF4832 | DUF4874 |
| TC | MGYG000004697_3 | MGYG000004697_3_46 | 46661 | 48199 | + | 2.A.66.1.40 |
| pfam | MGYG000004697_3 | MGYG000004697_3_47 | 48196 | 49392 | + | NTP_transf_5 |
| NULL(UNKNOWN) | MGYG000004697_3 | MGYG000004697_3_48 | 49518 | 49892 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004697_3 | MGYG000004697_3_49 | 49998 | 51713 | - | 3.A.1.135.5 |
| NULL(UNKNOWN) | MGYG000004697_3 | MGYG000004697_3_50 | 51788 | 52942 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004697_3 | MGYG000004697_3_51 | 53052 | 53474 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004697_3 | MGYG000004697_3_52 | 53574 | 55700 | + | GH36 |
Gene ID: MGYG000004697_3_39
Type: CAZyme
Location: 38613 - 40073 (+)
Type: CAZyme
Location: 38613 - 40073 (+)
Gene ID: MGYG000004697_3_40
Type: pfam
Location: 40098 - 41543 (+)
Type: pfam
Location: 40098 - 41543 (+)
Gene ID: MGYG000004697_3_41
Type: pfam
Location: 41564 - 41950 (+)
Type: pfam
Location: 41564 - 41950 (+)
Gene ID: MGYG000004697_3_42
Type: CAZyme
Location: 41947 - 43161 (+)
Type: CAZyme
Location: 41947 - 43161 (+)
Gene ID: MGYG000004697_3_43
Type: CAZyme
Location: 43164 - 43946 (+)
Type: CAZyme
Location: 43164 - 43946 (+)
Gene ID: MGYG000004697_3_44
Type: pfam
Location: 43936 - 45174 (+)
Type: pfam
Location: 43936 - 45174 (+)
Gene ID: MGYG000004697_3_45
Type: pfam
Location: 45171 - 46589 (-)
Type: pfam
Location: 45171 - 46589 (-)
Gene ID: MGYG000004697_3_46
Type: TC
Location: 46661 - 48199 (+)
Type: TC
Location: 46661 - 48199 (+)
Gene ID: MGYG000004697_3_47
Type: pfam
Location: 48196 - 49392 (+)
Type: pfam
Location: 48196 - 49392 (+)
Gene ID: MGYG000004697_3_48
Type:
Location: 49518 - 49892 (+)
Type:
Location: 49518 - 49892 (+)
Gene ID: MGYG000004697_3_49
Type: TC
Location: 49998 - 51713 (-)
Type: TC
Location: 49998 - 51713 (-)
Gene ID: MGYG000004697_3_50
Type:
Location: 51788 - 52942 (-)
Type:
Location: 51788 - 52942 (-)
Gene ID: MGYG000004697_3_51
Type:
Location: 53052 - 53474 (+)
Type:
Location: 53052 - 53474 (+)
Gene ID: MGYG000004697_3_52
Type: CAZyme
Location: 53574 - 55700 (+)
Type: CAZyme
Location: 53574 - 55700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_3_40 | vegetarian > omnivore | 1.48652 | 0.01067 |
| MGYG000004697_3_40 | vegetarian > vegan | 1.35162 | 0.00305 |
| MGYG000004697_3_43 | vegetarian > omnivore | 1.48731 | 0.01067 |
| MGYG000004697_3_43 | vegetarian > vegan | 1.63999 | 0.00305 |