Cluster: MGYG000004697_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_05880
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_13 | MGYG000004697_13_38 | 40854 | 42194 | + | 2.A.66.1.28 |
| TF | MGYG000004697_13 | MGYG000004697_13_39 | 42199 | 43026 | + | MerR |
| TC | MGYG000004697_13 | MGYG000004697_13_40 | 43185 | 44549 | + | 2.A.66.1.13 |
| TC | MGYG000004697_13 | MGYG000004697_13_41 | 44631 | 46016 | + | 2.A.2.3.1 |
| pfam | MGYG000004697_13 | MGYG000004697_13_42 | 46013 | 46840 | + | HAD_2 |
| CAZyme | MGYG000004697_13 | MGYG000004697_13_43 | 46837 | 48606 | + | GH3 |
| CAZyme | MGYG000004697_13 | MGYG000004697_13_44 | 48677 | 49942 | + | CE17 |
| TC | MGYG000004697_13 | MGYG000004697_13_45 | 49939 | 50520 | - | 2.A.107.1.2 |
Gene ID: MGYG000004697_13_38
Type: TC
Location: 40854 - 42194 (+)
Type: TC
Location: 40854 - 42194 (+)
Gene ID: MGYG000004697_13_39
Type: TF
Location: 42199 - 43026 (+)
Type: TF
Location: 42199 - 43026 (+)
Gene ID: MGYG000004697_13_40
Type: TC
Location: 43185 - 44549 (+)
Type: TC
Location: 43185 - 44549 (+)
Gene ID: MGYG000004697_13_41
Type: TC
Location: 44631 - 46016 (+)
Type: TC
Location: 44631 - 46016 (+)
Gene ID: MGYG000004697_13_42
Type: pfam
Location: 46013 - 46840 (+)
Type: pfam
Location: 46013 - 46840 (+)
Gene ID: MGYG000004697_13_43
Type: CAZyme
Location: 46837 - 48606 (+)
Type: CAZyme
Location: 46837 - 48606 (+)
Gene ID: MGYG000004697_13_44
Type: CAZyme
Location: 48677 - 49942 (+)
Type: CAZyme
Location: 48677 - 49942 (+)
Gene ID: MGYG000004697_13_45
Type: TC
Location: 49939 - 50520 (-)
Type: TC
Location: 49939 - 50520 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_13_38 | vegetarian > omnivore | 1.05502 | 0.01067 |
| MGYG000004697_13_38 | vegetarian > vegan | 2.32617 | 0.00305 |
| MGYG000004697_13_41 | vegetarian > vegan | 3.33147 | 0.00305 |