Cluster: MGYG000004697_CGC14
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_09310
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004697_12 | MGYG000004697_12_28 | 31809 | 33527 | - | CE4 |
| TC | MGYG000004697_12 | MGYG000004697_12_29 | 33713 | 34912 | - | 2.A.86.1.8 |
| pfam | MGYG000004697_12 | MGYG000004697_12_30 | 35013 | 35369 | - | SpoVAC_SpoVAEB |
| TC | MGYG000004697_12 | MGYG000004697_12_31 | 35384 | 36523 | - | 9.A.11.1.1 |
| TC | MGYG000004697_12 | MGYG000004697_12_32 | 36551 | 38806 | - | 2.A.6.4.2 |
| pfam | MGYG000004697_12 | MGYG000004697_12_33 | 38867 | 39349 | - | dCMP_cyt_deam_1 | MafB19-deam |
| pfam | MGYG000004697_12 | MGYG000004697_12_34 | 39471 | 40454 | - | PTA_PTB |
| TC | MGYG000004697_12 | MGYG000004697_12_35 | 40600 | 42480 | - | 3.A.1.135.5 |
| TC | MGYG000004697_12 | MGYG000004697_12_36 | 42477 | 44219 | - | 3.A.1.135.5 |
Gene ID: MGYG000004697_12_28
Type: CAZyme
Location: 31809 - 33527 (-)
Type: CAZyme
Location: 31809 - 33527 (-)
Gene ID: MGYG000004697_12_29
Type: TC
Location: 33713 - 34912 (-)
Type: TC
Location: 33713 - 34912 (-)
Gene ID: MGYG000004697_12_30
Type: pfam
Location: 35013 - 35369 (-)
Type: pfam
Location: 35013 - 35369 (-)
Gene ID: MGYG000004697_12_31
Type: TC
Location: 35384 - 36523 (-)
Type: TC
Location: 35384 - 36523 (-)
Gene ID: MGYG000004697_12_32
Type: TC
Location: 36551 - 38806 (-)
Type: TC
Location: 36551 - 38806 (-)
Gene ID: MGYG000004697_12_33
Type: pfam
Location: 38867 - 39349 (-)
Type: pfam
Location: 38867 - 39349 (-)
Gene ID: MGYG000004697_12_34
Type: pfam
Location: 39471 - 40454 (-)
Type: pfam
Location: 39471 - 40454 (-)
Gene ID: MGYG000004697_12_35
Type: TC
Location: 40600 - 42480 (-)
Type: TC
Location: 40600 - 42480 (-)
Gene ID: MGYG000004697_12_36
Type: TC
Location: 42477 - 44219 (-)
Type: TC
Location: 42477 - 44219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_12_30 | vegetarian > vegan | 5.18976 | 0.00305 |
| MGYG000004697_12_31 | vegetarian > vegan | 2.47925 | 0.00305 |