Cluster: MGYG000004696_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004696
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004696_16 | MGYG000004696_16_2 | 192 | 1925 | - | GH13_30 |
| STP | MGYG000004696_16 | MGYG000004696_16_3 | 2445 | 3191 | - | STAS |
| STP | MGYG000004696_16 | MGYG000004696_16_4 | 3270 | 5615 | - | GAF | SpoIIE |
| TC | MGYG000004696_16 | MGYG000004696_16_5 | 6364 | 7392 | - | 3.A.1.5.36 |
| TC | MGYG000004696_16 | MGYG000004696_16_6 | 7392 | 8483 | - | 3.A.1.5.34 |
| TC | MGYG000004696_16 | MGYG000004696_16_7 | 8486 | 9421 | - | 3.A.1.5.11 |
| TC | MGYG000004696_16 | MGYG000004696_16_8 | 9436 | 10473 | - | 3.A.1.5.37 |
| TC | MGYG000004696_16 | MGYG000004696_16_9 | 10630 | 12306 | - | 3.A.1.5.35 |
Gene ID: MGYG000004696_16_2
Type: CAZyme
Location: 192 - 1925 (-)
Type: CAZyme
Location: 192 - 1925 (-)
Gene ID: MGYG000004696_16_3
Type: STP
Location: 2445 - 3191 (-)
Type: STP
Location: 2445 - 3191 (-)
Gene ID: MGYG000004696_16_4
Type: STP
Location: 3270 - 5615 (-)
Type: STP
Location: 3270 - 5615 (-)
Gene ID: MGYG000004696_16_5
Type: TC
Location: 6364 - 7392 (-)
Type: TC
Location: 6364 - 7392 (-)
Gene ID: MGYG000004696_16_6
Type: TC
Location: 7392 - 8483 (-)
Type: TC
Location: 7392 - 8483 (-)
Gene ID: MGYG000004696_16_7
Type: TC
Location: 8486 - 9421 (-)
Type: TC
Location: 8486 - 9421 (-)
Gene ID: MGYG000004696_16_8
Type: TC
Location: 9436 - 10473 (-)
Type: TC
Location: 9436 - 10473 (-)
Gene ID: MGYG000004696_16_9
Type: TC
Location: 10630 - 12306 (-)
Type: TC
Location: 10630 - 12306 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900554665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.