Cluster: MGYG000004687_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004687
- CGC Family ID: CGCFAM_11033
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004687_44 | MGYG000004687_44_7 | 3506 | 4459 | - | GT9 |
| CAZyme | MGYG000004687_44 | MGYG000004687_44_8 | 4528 | 5592 | - | GT9 |
| pfam | MGYG000004687_44 | MGYG000004687_44_9 | 5626 | 6039 | - | MliC |
| pfam | MGYG000004687_44 | MGYG000004687_44_10 | 6094 | 7446 | - | LysM_OapA |
| TC | MGYG000004687_44 | MGYG000004687_44_11 | 7718 | 8086 | + | 3.A.11.2.2 |
| TC | MGYG000004687_44 | MGYG000004687_44_12 | 8249 | 9139 | + | 2.A.25.1.6 |
Gene ID: MGYG000004687_44_7
Type: CAZyme
Location: 3506 - 4459 (-)
Type: CAZyme
Location: 3506 - 4459 (-)
Gene ID: MGYG000004687_44_8
Type: CAZyme
Location: 4528 - 5592 (-)
Type: CAZyme
Location: 4528 - 5592 (-)
Gene ID: MGYG000004687_44_9
Type: pfam
Location: 5626 - 6039 (-)
Type: pfam
Location: 5626 - 6039 (-)
Gene ID: MGYG000004687_44_10
Type: pfam
Location: 6094 - 7446 (-)
Type: pfam
Location: 6094 - 7446 (-)
Gene ID: MGYG000004687_44_11
Type: TC
Location: 7718 - 8086 (+)
Type: TC
Location: 7718 - 8086 (+)
Gene ID: MGYG000004687_44_12
Type: TC
Location: 8249 - 9139 (+)
Type: TC
Location: 8249 - 9139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A parahaemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.