Cluster: MGYG000004687_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004687
- CGC Family ID: CGCFAM_11032
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004687_40 | MGYG000004687_40_9 | 5955 | 7361 | - | GH32 |
| STP | MGYG000004687_40 | MGYG000004687_40_10 | 7471 | 8394 | - | PfkB |
| pfam | MGYG000004687_40 | MGYG000004687_40_11 | 8539 | 9624 | + | Cu-oxidase | Cu-oxidase_2 | Cu-oxidase_2 | Cu-oxidase_3 |
| TC | MGYG000004687_40 | MGYG000004687_40_12 | 9979 | 10641 | - | 1.A.62.2.3 |
| TC | MGYG000004687_40 | MGYG000004687_40_13 | 10803 | 15146 | - | 1.B.40.2.2 |
Gene ID: MGYG000004687_40_9
Type: CAZyme
Location: 5955 - 7361 (-)
Type: CAZyme
Location: 5955 - 7361 (-)
Gene ID: MGYG000004687_40_10
Type: STP
Location: 7471 - 8394 (-)
Type: STP
Location: 7471 - 8394 (-)
Gene ID: MGYG000004687_40_11
Type: pfam
Location: 8539 - 9624 (+)
Type: pfam
Location: 8539 - 9624 (+)
Gene ID: MGYG000004687_40_12
Type: TC
Location: 9979 - 10641 (-)
Type: TC
Location: 9979 - 10641 (-)
Gene ID: MGYG000004687_40_13
Type: TC
Location: 10803 - 15146 (-)
Type: TC
Location: 10803 - 15146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A parahaemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.