Cluster: MGYG000004687_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004687
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004687_21 | MGYG000004687_21_22 | 17068 | 18378 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | MGYG000004687_21 | MGYG000004687_21_23 | 18381 | 19502 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004687_21 | MGYG000004687_21_24 | 19480 | 20211 | - | GT32 |
| CAZyme | MGYG000004687_21 | MGYG000004687_21_25 | 20237 | 21223 | - | GT2 |
| CAZyme | MGYG000004687_21 | MGYG000004687_21_26 | 21228 | 22082 | - | GT2 |
| CAZyme | MGYG000004687_21 | MGYG000004687_21_27 | 22079 | 23176 | - | GT4 |
Gene ID: MGYG000004687_21_22
Type: TC
Location: 17068 - 18378 (-)
Type: TC
Location: 17068 - 18378 (-)
Gene ID: MGYG000004687_21_23
Type:
Location: 18381 - 19502 (-)
Type:
Location: 18381 - 19502 (-)
Gene ID: MGYG000004687_21_24
Type: CAZyme
Location: 19480 - 20211 (-)
Type: CAZyme
Location: 19480 - 20211 (-)
Gene ID: MGYG000004687_21_25
Type: CAZyme
Location: 20237 - 21223 (-)
Type: CAZyme
Location: 20237 - 21223 (-)
Gene ID: MGYG000004687_21_26
Type: CAZyme
Location: 21228 - 22082 (-)
Type: CAZyme
Location: 21228 - 22082 (-)
Gene ID: MGYG000004687_21_27
Type: CAZyme
Location: 22079 - 23176 (-)
Type: CAZyme
Location: 22079 - 23176 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A parahaemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.