Cluster: MGYG000004687_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004687
- CGC Family ID: CGCFAM_11031
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004687_12 | MGYG000004687_12_48 | 47663 | 48289 | + | 1.B.46.1.1 |
| TF | MGYG000004687_12 | MGYG000004687_12_49 | 48359 | 48667 | + | Trp_repressor |
| CAZyme | MGYG000004687_12 | MGYG000004687_12_50 | 48654 | 49460 | + | GT51 |
| pfam | MGYG000004687_12 | MGYG000004687_12_51 | 49586 | 51076 | - | DUF87 | HerA_C |
| NULL(UNKNOWN) | MGYG000004687_12 | MGYG000004687_12_52 | 51095 | 51526 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004687_12 | MGYG000004687_12_53 | 51528 | 52748 | - | 1.I.1.1.3 |
Gene ID: MGYG000004687_12_48
Type: TC
Location: 47663 - 48289 (+)
Type: TC
Location: 47663 - 48289 (+)
Gene ID: MGYG000004687_12_49
Type: TF
Location: 48359 - 48667 (+)
Type: TF
Location: 48359 - 48667 (+)
Gene ID: MGYG000004687_12_50
Type: CAZyme
Location: 48654 - 49460 (+)
Type: CAZyme
Location: 48654 - 49460 (+)
Gene ID: MGYG000004687_12_51
Type: pfam
Location: 49586 - 51076 (-)
Type: pfam
Location: 49586 - 51076 (-)
Gene ID: MGYG000004687_12_52
Type:
Location: 51095 - 51526 (-)
Type:
Location: 51095 - 51526 (-)
Gene ID: MGYG000004687_12_53
Type: TC
Location: 51528 - 52748 (-)
Type: TC
Location: 51528 - 52748 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A parahaemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.