Cluster: MGYG000004687_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004687
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004687_5 | MGYG000004687_5_70 | 77598 | 78653 | - | GT28 |
| TC | MGYG000004687_5 | MGYG000004687_5_71 | 78797 | 79975 | - | 2.A.103.1.1 |
| pfam | MGYG000004687_5 | MGYG000004687_5_72 | 79975 | 81276 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| NULL(UNKNOWN) | MGYG000004687_5 | MGYG000004687_5_73 | 81339 | 81770 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004687_5 | MGYG000004687_5_74 | 81919 | 83001 | - | 9.B.146.1.6 |
Gene ID: MGYG000004687_5_70
Type: CAZyme
Location: 77598 - 78653 (-)
Type: CAZyme
Location: 77598 - 78653 (-)
Gene ID: MGYG000004687_5_71
Type: TC
Location: 78797 - 79975 (-)
Type: TC
Location: 78797 - 79975 (-)
Gene ID: MGYG000004687_5_72
Type: pfam
Location: 79975 - 81276 (-)
Type: pfam
Location: 79975 - 81276 (-)
Gene ID: MGYG000004687_5_73
Type:
Location: 81339 - 81770 (-)
Type:
Location: 81339 - 81770 (-)
Gene ID: MGYG000004687_5_74
Type: TC
Location: 81919 - 83001 (-)
Type: TC
Location: 81919 - 83001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A parahaemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.