Cluster: MGYG000004681_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004681
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004681_3 | MGYG000004681_3_26 | 29119 | 31446 | - | 9.A.8.1.6 |
| TC | MGYG000004681_3 | MGYG000004681_3_27 | 31569 | 31790 | - | 9.A.8.1.6 |
| STP | MGYG000004681_3 | MGYG000004681_3_28 | 31830 | 32072 | - | FeoA |
| STP | MGYG000004681_3 | MGYG000004681_3_29 | 32261 | 32509 | - | PTS-HPr |
| TC | MGYG000004681_3 | MGYG000004681_3_30 | 32932 | 34395 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000004681_3 | MGYG000004681_3_31 | 34549 | 35004 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004681_3 | MGYG000004681_3_32 | 35008 | 38016 | - | GH2 |
Gene ID: MGYG000004681_3_26
Type: TC
Location: 29119 - 31446 (-)
Type: TC
Location: 29119 - 31446 (-)
Gene ID: MGYG000004681_3_27
Type: TC
Location: 31569 - 31790 (-)
Type: TC
Location: 31569 - 31790 (-)
Gene ID: MGYG000004681_3_28
Type: STP
Location: 31830 - 32072 (-)
Type: STP
Location: 31830 - 32072 (-)
Gene ID: MGYG000004681_3_29
Type: STP
Location: 32261 - 32509 (-)
Type: STP
Location: 32261 - 32509 (-)
Gene ID: MGYG000004681_3_30
Type: TC
Location: 32932 - 34395 (-)
Type: TC
Location: 32932 - 34395 (-)
Gene ID: MGYG000004681_3_31
Type:
Location: 34549 - 35004 (-)
Type:
Location: 34549 - 35004 (-)
Gene ID: MGYG000004681_3_32
Type: CAZyme
Location: 35008 - 38016 (-)
Type: CAZyme
Location: 35008 - 38016 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905209765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.