Cluster: MGYG000004680_CGC42
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004680
- CGC Family ID: CGCFAM_00663
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004680_47 | MGYG000004680_47_5 | 7387 | 8775 | - | 4.A.1.2.6 |
| CAZyme | MGYG000004680_47 | MGYG000004680_47_6 | 8787 | 11375 | - | GH106 |
| TF | MGYG000004680_47 | MGYG000004680_47_7 | 11613 | 12599 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004680_47 | MGYG000004680_47_8 | 12886 | 14892 | + | 2.A.72.1.3 |
| STP | MGYG000004680_47 | MGYG000004680_47_9 | 15212 | 15691 | - | TPR_2 |
| NULL(UNKNOWN) | MGYG000004680_47 | MGYG000004680_47_10 | 15961 | 16560 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004680_47 | MGYG000004680_47_11 | 16761 | 19046 | - | GH3 |
| CAZyme | MGYG000004680_47 | MGYG000004680_47_12 | 19086 | 21827 | - | CBM67 | GH78 |
| TF | MGYG000004680_47 | MGYG000004680_47_13 | 21974 | 23188 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004680_47 | MGYG000004680_47_14 | 23177 | 24574 | - | 2.A.2.3.2 |
Gene ID: MGYG000004680_47_5
Type: TC
Location: 7387 - 8775 (-)
Type: TC
Location: 7387 - 8775 (-)
Gene ID: MGYG000004680_47_6
Type: CAZyme
Location: 8787 - 11375 (-)
Type: CAZyme
Location: 8787 - 11375 (-)
Gene ID: MGYG000004680_47_7
Type: TF
Location: 11613 - 12599 (+)
Type: TF
Location: 11613 - 12599 (+)
Gene ID: MGYG000004680_47_8
Type: TC
Location: 12886 - 14892 (+)
Type: TC
Location: 12886 - 14892 (+)
Gene ID: MGYG000004680_47_9
Type: STP
Location: 15212 - 15691 (-)
Type: STP
Location: 15212 - 15691 (-)
Gene ID: MGYG000004680_47_10
Type:
Location: 15961 - 16560 (-)
Type:
Location: 15961 - 16560 (-)
Gene ID: MGYG000004680_47_11
Type: CAZyme
Location: 16761 - 19046 (-)
Type: CAZyme
Location: 16761 - 19046 (-)
Gene ID: MGYG000004680_47_12
Type: CAZyme
Location: 19086 - 21827 (-)
Type: CAZyme
Location: 19086 - 21827 (-)
Gene ID: MGYG000004680_47_13
Type: TF
Location: 21974 - 23188 (+)
Type: TF
Location: 21974 - 23188 (+)
Gene ID: MGYG000004680_47_14
Type: TC
Location: 23177 - 24574 (-)
Type: TC
Location: 23177 - 24574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora sp905215155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.