Cluster: MGYG000004680_CGC37
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004680
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004680_40 | MGYG000004680_40_18 | 13134 | 14780 | + | GH43_4 |
| TC | MGYG000004680_40 | MGYG000004680_40_19 | 15133 | 17076 | + | 4.A.1.2.11 |
| CAZyme | MGYG000004680_40 | MGYG000004680_40_20 | 17089 | 18513 | + | GH1 |
| pfam | MGYG000004680_40 | MGYG000004680_40_21 | 18554 | 19393 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000004680_40 | MGYG000004680_40_22 | 19405 | 20583 | + | 2.A.1.2.90 |
| peptidase | MGYG000004680_40 | MGYG000004680_40_23 | 20660 | 22333 | - | S08.UNA |
| STP | MGYG000004680_40 | MGYG000004680_40_24 | 22522 | 23073 | - | Nitroreductase | Nitroreductase |
| CAZyme | MGYG000004680_40 | MGYG000004680_40_25 | 23160 | 25595 | - | GH94 |
| TF | MGYG000004680_40 | MGYG000004680_40_26 | 25889 | 26899 | + | LacI |
| NULL(UNKNOWN) | MGYG000004680_40 | MGYG000004680_40_27 | 26936 | 28342 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004680_40 | MGYG000004680_40_28 | 28398 | 29333 | + | 3.A.1.1.34 |
| TC | MGYG000004680_40 | MGYG000004680_40_29 | 29333 | 30172 | + | 3.A.1.1.48 |
Gene ID: MGYG000004680_40_18
Type: CAZyme
Location: 13134 - 14780 (+)
Type: CAZyme
Location: 13134 - 14780 (+)
Gene ID: MGYG000004680_40_19
Type: TC
Location: 15133 - 17076 (+)
Type: TC
Location: 15133 - 17076 (+)
Gene ID: MGYG000004680_40_20
Type: CAZyme
Location: 17089 - 18513 (+)
Type: CAZyme
Location: 17089 - 18513 (+)
Gene ID: MGYG000004680_40_21
Type: pfam
Location: 18554 - 19393 (+)
Type: pfam
Location: 18554 - 19393 (+)
Gene ID: MGYG000004680_40_22
Type: TC
Location: 19405 - 20583 (+)
Type: TC
Location: 19405 - 20583 (+)
Gene ID: MGYG000004680_40_23
Type: peptidase
Location: 20660 - 22333 (-)
Type: peptidase
Location: 20660 - 22333 (-)
Gene ID: MGYG000004680_40_24
Type: STP
Location: 22522 - 23073 (-)
Type: STP
Location: 22522 - 23073 (-)
Gene ID: MGYG000004680_40_25
Type: CAZyme
Location: 23160 - 25595 (-)
Type: CAZyme
Location: 23160 - 25595 (-)
Gene ID: MGYG000004680_40_26
Type: TF
Location: 25889 - 26899 (+)
Type: TF
Location: 25889 - 26899 (+)
Gene ID: MGYG000004680_40_27
Type:
Location: 26936 - 28342 (+)
Type:
Location: 26936 - 28342 (+)
Gene ID: MGYG000004680_40_28
Type: TC
Location: 28398 - 29333 (+)
Type: TC
Location: 28398 - 29333 (+)
Gene ID: MGYG000004680_40_29
Type: TC
Location: 29333 - 30172 (+)
Type: TC
Location: 29333 - 30172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora sp905215155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.