dbCAN Logo

Cluster: MGYG000004680_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004680_33 MGYG000004680_33_20 24931 25959 + 3.A.1.1.10
TC MGYG000004680_33 MGYG000004680_33_21 25961 26872 + 3.A.1.1.10
TC MGYG000004680_33 MGYG000004680_33_22 26888 28585 + 3.A.1.1.9
CAZyme MGYG000004680_33 MGYG000004680_33_23 28600 30072 + GH32
TF MGYG000004680_33 MGYG000004680_33_24 30111 31163 - HTH_AraC | HTH_AraC
TC MGYG000004680_33 MGYG000004680_33_25 31304 32662 + 2.A.2.3.2
CAZyme MGYG000004680_33 MGYG000004680_33_26 32678 34240 + GH78
Gene ID: MGYG000004680_33_20
Type: TC
Location: 24931 - 25959 (+)
Gene ID: MGYG000004680_33_21
Type: TC
Location: 25961 - 26872 (+)
Gene ID: MGYG000004680_33_22
Type: TC
Location: 26888 - 28585 (+)
Gene ID: MGYG000004680_33_23
Type: CAZyme
Location: 28600 - 30072 (+)
Gene ID: MGYG000004680_33_24
Type: TF
Location: 30111 - 31163 (-)
Gene ID: MGYG000004680_33_25
Type: TC
Location: 31304 - 32662 (+)
Gene ID: MGYG000004680_33_26
Type: CAZyme
Location: 32678 - 34240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004680_33_22 vegan > omnivore 1.58153 0.02695
MGYG000004680_33_22 vegetarian > omnivore 1.03122 0.03783

🧭 Explore Read Mapping of CGC

← Back to Cluster List