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Cluster: MGYG000004680_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004680_29 MGYG000004680_29_1 917 1909 + 3.A.1.14.4
TC MGYG000004680_29 MGYG000004680_29_2 1930 2943 + 3.A.1.14.4
TC MGYG000004680_29 MGYG000004680_29_3 2940 3959 + 3.A.1.14.4
TC MGYG000004680_29 MGYG000004680_29_4 3977 4789 + 3.A.1.14.4
pfam MGYG000004680_29 MGYG000004680_29_5 4921 6492 - SEC-C | PRiA4_ORF3
STP MGYG000004680_29 MGYG000004680_29_6 6880 7803 + SBP_bac_1
TC MGYG000004680_29 MGYG000004680_29_7 7882 8817 + 3.A.1.7.5
TC MGYG000004680_29 MGYG000004680_29_8 8810 9718 + 3.A.1.7.5
TC MGYG000004680_29 MGYG000004680_29_9 9715 10479 + 3.A.1.7.5
pfam MGYG000004680_29 MGYG000004680_29_10 10515 11177 + PhoU | PhoU
CAZyme MGYG000004680_29 MGYG000004680_29_11 11420 12559 - CE9
Gene ID: MGYG000004680_29_1
Type: TC
Location: 917 - 1909 (+)
Gene ID: MGYG000004680_29_2
Type: TC
Location: 1930 - 2943 (+)
Gene ID: MGYG000004680_29_3
Type: TC
Location: 2940 - 3959 (+)
Gene ID: MGYG000004680_29_4
Type: TC
Location: 3977 - 4789 (+)
Gene ID: MGYG000004680_29_5
Type: pfam
Location: 4921 - 6492 (-)
Gene ID: MGYG000004680_29_6
Type: STP
Location: 6880 - 7803 (+)
Gene ID: MGYG000004680_29_7
Type: TC
Location: 7882 - 8817 (+)
Gene ID: MGYG000004680_29_8
Type: TC
Location: 8810 - 9718 (+)
Gene ID: MGYG000004680_29_9
Type: TC
Location: 9715 - 10479 (+)
Gene ID: MGYG000004680_29_10
Type: pfam
Location: 10515 - 11177 (+)
Gene ID: MGYG000004680_29_11
Type: CAZyme
Location: 11420 - 12559 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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