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Cluster: MGYG000004680_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004680_24 MGYG000004680_24_30 29009 30451 - GH28
STP MGYG000004680_24 MGYG000004680_24_31 30477 32141 - SBP_bac_1
TC MGYG000004680_24 MGYG000004680_24_32 32182 33099 - 3.A.1.1.29
TC MGYG000004680_24 MGYG000004680_24_33 33115 34029 - 3.A.1.1.29
TF MGYG000004680_24 MGYG000004680_24_34 34284 36611 + HTH_AraC | HTH_AraC
STP MGYG000004680_24 MGYG000004680_24_35 36608 38191 + SBP_bac_1
TC MGYG000004680_24 MGYG000004680_24_36 38241 38804 + 2.A.107.1.2
NULL(UNKNOWN) MGYG000004680_24 MGYG000004680_24_37 38870 39181 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004680_24 MGYG000004680_24_38 39505 40314 - Polysacc_deac_1
CAZyme MGYG000004680_24 MGYG000004680_24_39 40311 41360 - GH105
CAZyme MGYG000004680_24 MGYG000004680_24_40 41364 44510 - CE12 | PL11
CAZyme MGYG000004680_24 MGYG000004680_24_41 44534 47170 - PL26
pfam MGYG000004680_24 MGYG000004680_24_42 47248 48828 - SBP_bac_8
TC MGYG000004680_24 MGYG000004680_24_43 48857 49759 - 3.A.1.1.29
TC MGYG000004680_24 MGYG000004680_24_44 49776 50744 - 3.A.1.1.10
Gene ID: MGYG000004680_24_30
Type: CAZyme
Location: 29009 - 30451 (-)
Gene ID: MGYG000004680_24_31
Type: STP
Location: 30477 - 32141 (-)
Gene ID: MGYG000004680_24_32
Type: TC
Location: 32182 - 33099 (-)
Gene ID: MGYG000004680_24_33
Type: TC
Location: 33115 - 34029 (-)
Gene ID: MGYG000004680_24_34
Type: TF
Location: 34284 - 36611 (+)
Gene ID: MGYG000004680_24_35
Type: STP
Location: 36608 - 38191 (+)
Gene ID: MGYG000004680_24_36
Type: TC
Location: 38241 - 38804 (+)
Gene ID: MGYG000004680_24_37
Type:
Location: 38870 - 39181 (-)
Gene ID: MGYG000004680_24_38
Type: pfam
Location: 39505 - 40314 (-)
Gene ID: MGYG000004680_24_39
Type: CAZyme
Location: 40311 - 41360 (-)
Gene ID: MGYG000004680_24_40
Type: CAZyme
Location: 41364 - 44510 (-)
Gene ID: MGYG000004680_24_41
Type: CAZyme
Location: 44534 - 47170 (-)
Gene ID: MGYG000004680_24_42
Type: pfam
Location: 47248 - 48828 (-)
Gene ID: MGYG000004680_24_43
Type: TC
Location: 48857 - 49759 (-)
Gene ID: MGYG000004680_24_44
Type: TC
Location: 49776 - 50744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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