Cluster: MGYG000004680_CGC22
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004680
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004680_18 | MGYG000004680_18_20 | 18983 | 19306 | - | 2.A.7.1.1 |
| STP | MGYG000004680_18 | MGYG000004680_18_21 | 19387 | 20049 | - | NUDIX |
| TF | MGYG000004680_18 | MGYG000004680_18_22 | 20061 | 20897 | - | MerR |
| TC | MGYG000004680_18 | MGYG000004680_18_23 | 21079 | 22836 | + | 3.A.1.135.7 |
| TC | MGYG000004680_18 | MGYG000004680_18_24 | 22823 | 24610 | + | 3.A.1.135.9 |
| CAZyme | MGYG000004680_18 | MGYG000004680_18_25 | 24681 | 26315 | - | CBM91 | GH43_11 |
| CAZyme | MGYG000004680_18 | MGYG000004680_18_26 | 26319 | 28322 | - | GH42 |
| TC | MGYG000004680_18 | MGYG000004680_18_27 | 28319 | 29716 | - | 2.A.2.3.3 |
| CAZyme | MGYG000004680_18 | MGYG000004680_18_28 | 29761 | 30963 | - | GH5_44 |
| TF | MGYG000004680_18 | MGYG000004680_18_29 | 31116 | 32324 | + | HTH_AraC |
| pfam | MGYG000004680_18 | MGYG000004680_18_30 | 32336 | 33763 | - | DUF1266 |
| TC | MGYG000004680_18 | MGYG000004680_18_31 | 34514 | 35860 | - | 2.A.3.1.13 |
Gene ID: MGYG000004680_18_20
Type: TC
Location: 18983 - 19306 (-)
Type: TC
Location: 18983 - 19306 (-)
Gene ID: MGYG000004680_18_21
Type: STP
Location: 19387 - 20049 (-)
Type: STP
Location: 19387 - 20049 (-)
Gene ID: MGYG000004680_18_22
Type: TF
Location: 20061 - 20897 (-)
Type: TF
Location: 20061 - 20897 (-)
Gene ID: MGYG000004680_18_23
Type: TC
Location: 21079 - 22836 (+)
Type: TC
Location: 21079 - 22836 (+)
Gene ID: MGYG000004680_18_24
Type: TC
Location: 22823 - 24610 (+)
Type: TC
Location: 22823 - 24610 (+)
Gene ID: MGYG000004680_18_25
Type: CAZyme
Location: 24681 - 26315 (-)
Type: CAZyme
Location: 24681 - 26315 (-)
Gene ID: MGYG000004680_18_26
Type: CAZyme
Location: 26319 - 28322 (-)
Type: CAZyme
Location: 26319 - 28322 (-)
Gene ID: MGYG000004680_18_27
Type: TC
Location: 28319 - 29716 (-)
Type: TC
Location: 28319 - 29716 (-)
Gene ID: MGYG000004680_18_28
Type: CAZyme
Location: 29761 - 30963 (-)
Type: CAZyme
Location: 29761 - 30963 (-)
Gene ID: MGYG000004680_18_29
Type: TF
Location: 31116 - 32324 (+)
Type: TF
Location: 31116 - 32324 (+)
Gene ID: MGYG000004680_18_30
Type: pfam
Location: 32336 - 33763 (-)
Type: pfam
Location: 32336 - 33763 (-)
Gene ID: MGYG000004680_18_31
Type: TC
Location: 34514 - 35860 (-)
Type: TC
Location: 34514 - 35860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora sp905215155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.