Cluster: MGYG000004680_CGC14
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004680
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004680_6 | MGYG000004680_6_62 | 60328 | 61998 | - | 3.A.18.1.1 |
| pfam | MGYG000004680_6 | MGYG000004680_6_63 | 62325 | 62924 | - | Cytidylate_kin2 |
| TC | MGYG000004680_6 | MGYG000004680_6_64 | 62940 | 63602 | - | 3.A.1.3.12 |
| TC | MGYG000004680_6 | MGYG000004680_6_65 | 63599 | 64330 | - | 3.A.1.3.16 |
| TC | MGYG000004680_6 | MGYG000004680_6_66 | 64355 | 65245 | - | 3.A.1.3.16 |
| TC | MGYG000004680_6 | MGYG000004680_6_67 | 65290 | 66021 | - | 3.A.1.3.16 |
| TC | MGYG000004680_6 | MGYG000004680_6_68 | 66197 | 67177 | - | 3.A.1.5.20 |
| TC | MGYG000004680_6 | MGYG000004680_6_69 | 67179 | 68198 | - | 3.A.1.5.2 |
| TC | MGYG000004680_6 | MGYG000004680_6_70 | 68215 | 69108 | - | 3.A.1.5.20 |
| TC | MGYG000004680_6 | MGYG000004680_6_71 | 69105 | 70058 | - | 3.A.1.5.20 |
| TC | MGYG000004680_6 | MGYG000004680_6_72 | 70157 | 71764 | - | 3.A.1.5.27 |
| NULL(UNKNOWN) | MGYG000004680_6 | MGYG000004680_6_73 | 72023 | 73663 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004680_6 | MGYG000004680_6_74 | 73681 | 74631 | - | ROK |
| CAZyme | MGYG000004680_6 | MGYG000004680_6_75 | 74935 | 76254 | - | GH28 |
| pfam | MGYG000004680_6 | MGYG000004680_6_76 | 76302 | 77153 | - | AP_endonuc_2 |
| CAZyme | MGYG000004680_6 | MGYG000004680_6_77 | 77176 | 78330 | - | GH177 |
| CAZyme | MGYG000004680_6 | MGYG000004680_6_78 | 78333 | 79352 | - | GH177 |
| TF | MGYG000004680_6 | MGYG000004680_6_79 | 79475 | 80320 | + | HTH_AraC | HTH_AraC |
| pfam | MGYG000004680_6 | MGYG000004680_6_80 | 80341 | 81171 | - | DUF6062 |
| CAZyme | MGYG000004680_6 | MGYG000004680_6_81 | 81256 | 82731 | - | GH1 |
| TC | MGYG000004680_6 | MGYG000004680_6_82 | 82751 | 84568 | - | 4.A.1.2.11 |
Gene ID: MGYG000004680_6_62
Type: TC
Location: 60328 - 61998 (-)
Type: TC
Location: 60328 - 61998 (-)
Gene ID: MGYG000004680_6_63
Type: pfam
Location: 62325 - 62924 (-)
Type: pfam
Location: 62325 - 62924 (-)
Gene ID: MGYG000004680_6_64
Type: TC
Location: 62940 - 63602 (-)
Type: TC
Location: 62940 - 63602 (-)
Gene ID: MGYG000004680_6_65
Type: TC
Location: 63599 - 64330 (-)
Type: TC
Location: 63599 - 64330 (-)
Gene ID: MGYG000004680_6_66
Type: TC
Location: 64355 - 65245 (-)
Type: TC
Location: 64355 - 65245 (-)
Gene ID: MGYG000004680_6_67
Type: TC
Location: 65290 - 66021 (-)
Type: TC
Location: 65290 - 66021 (-)
Gene ID: MGYG000004680_6_68
Type: TC
Location: 66197 - 67177 (-)
Type: TC
Location: 66197 - 67177 (-)
Gene ID: MGYG000004680_6_69
Type: TC
Location: 67179 - 68198 (-)
Type: TC
Location: 67179 - 68198 (-)
Gene ID: MGYG000004680_6_70
Type: TC
Location: 68215 - 69108 (-)
Type: TC
Location: 68215 - 69108 (-)
Gene ID: MGYG000004680_6_71
Type: TC
Location: 69105 - 70058 (-)
Type: TC
Location: 69105 - 70058 (-)
Gene ID: MGYG000004680_6_72
Type: TC
Location: 70157 - 71764 (-)
Type: TC
Location: 70157 - 71764 (-)
Gene ID: MGYG000004680_6_73
Type:
Location: 72023 - 73663 (-)
Type:
Location: 72023 - 73663 (-)
Gene ID: MGYG000004680_6_74
Type: pfam
Location: 73681 - 74631 (-)
Type: pfam
Location: 73681 - 74631 (-)
Gene ID: MGYG000004680_6_75
Type: CAZyme
Location: 74935 - 76254 (-)
Type: CAZyme
Location: 74935 - 76254 (-)
Gene ID: MGYG000004680_6_76
Type: pfam
Location: 76302 - 77153 (-)
Type: pfam
Location: 76302 - 77153 (-)
Gene ID: MGYG000004680_6_77
Type: CAZyme
Location: 77176 - 78330 (-)
Type: CAZyme
Location: 77176 - 78330 (-)
Gene ID: MGYG000004680_6_78
Type: CAZyme
Location: 78333 - 79352 (-)
Type: CAZyme
Location: 78333 - 79352 (-)
Gene ID: MGYG000004680_6_79
Type: TF
Location: 79475 - 80320 (+)
Type: TF
Location: 79475 - 80320 (+)
Gene ID: MGYG000004680_6_80
Type: pfam
Location: 80341 - 81171 (-)
Type: pfam
Location: 80341 - 81171 (-)
Gene ID: MGYG000004680_6_81
Type: CAZyme
Location: 81256 - 82731 (-)
Type: CAZyme
Location: 81256 - 82731 (-)
Gene ID: MGYG000004680_6_82
Type: TC
Location: 82751 - 84568 (-)
Type: TC
Location: 82751 - 84568 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora sp905215155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.