Cluster: MGYG000004680_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004680
- CGC Family ID: CGCFAM_00041
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004680_4 | MGYG000004680_4_41 | 42805 | 43941 | + | GH105 |
| TF | MGYG000004680_4 | MGYG000004680_4_42 | 44000 | 44866 | - | HTH_AraC |
| TC | MGYG000004680_4 | MGYG000004680_4_43 | 45096 | 46472 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | MGYG000004680_4 | MGYG000004680_4_44 | 46521 | 47231 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004680_4 | MGYG000004680_4_45 | 47237 | 48136 | + | 3.A.1.1.11 |
| TC | MGYG000004680_4 | MGYG000004680_4_46 | 48142 | 48993 | + | 3.A.1.1.11 |
| CAZyme | MGYG000004680_4 | MGYG000004680_4_47 | 49069 | 50622 | + | GH28 |
Gene ID: MGYG000004680_4_41
Type: CAZyme
Location: 42805 - 43941 (+)
Type: CAZyme
Location: 42805 - 43941 (+)
Gene ID: MGYG000004680_4_42
Type: TF
Location: 44000 - 44866 (-)
Type: TF
Location: 44000 - 44866 (-)
Gene ID: MGYG000004680_4_43
Type: TC
Location: 45096 - 46472 (+)
Type: TC
Location: 45096 - 46472 (+)
Gene ID: MGYG000004680_4_44
Type:
Location: 46521 - 47231 (+)
Type:
Location: 46521 - 47231 (+)
Gene ID: MGYG000004680_4_45
Type: TC
Location: 47237 - 48136 (+)
Type: TC
Location: 47237 - 48136 (+)
Gene ID: MGYG000004680_4_46
Type: TC
Location: 48142 - 48993 (+)
Type: TC
Location: 48142 - 48993 (+)
Gene ID: MGYG000004680_4_47
Type: CAZyme
Location: 49069 - 50622 (+)
Type: CAZyme
Location: 49069 - 50622 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora sp905215155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.