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Cluster: MGYG000004680_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004680_1 MGYG000004680_1_12 13878 14507 + 2.A.87.2.3
pfam MGYG000004680_1 MGYG000004680_1_13 14587 15558 - PTA_PTB
CAZyme MGYG000004680_1 MGYG000004680_1_14 15704 17173 - GH63
TC MGYG000004680_1 MGYG000004680_1_15 17157 17864 - 3.A.1.1.11
TF MGYG000004680_1 MGYG000004680_1_16 18032 18901 - HTH_AraC | HTH_AraC
CAZyme MGYG000004680_1 MGYG000004680_1_17 18906 19781 - GH43_17
TF MGYG000004680_1 MGYG000004680_1_18 20096 21706 + HTH_AraC | HTH_AraC
TC MGYG000004680_1 MGYG000004680_1_19 21859 22830 + 3.A.1.14.4
TC MGYG000004680_1 MGYG000004680_1_20 22882 23907 + 3.A.1.14.4
TC MGYG000004680_1 MGYG000004680_1_21 23907 24938 + 3.A.1.14.4
TC MGYG000004680_1 MGYG000004680_1_22 24953 25750 + 3.A.1.14.4
pfam MGYG000004680_1 MGYG000004680_1_23 26220 26567 + Ribonuclease_P
TC MGYG000004680_1 MGYG000004680_1_24 26807 28090 + 2.A.9.3.6
pfam MGYG000004680_1 MGYG000004680_1_25 28105 28770 + R3H | KH_KhpA-B | Jag_N
pfam MGYG000004680_1 MGYG000004680_1_26 28843 30222 + Ras | MMR_HSR1 | FeoB_N | AIG1 | Gtr1_RagA | TrmE_N | MnmE_helical
TC MGYG000004680_1 MGYG000004680_1_27 30302 32218 + 1.C.39.4.5
Gene ID: MGYG000004680_1_12
Type: TC
Location: 13878 - 14507 (+)
Gene ID: MGYG000004680_1_13
Type: pfam
Location: 14587 - 15558 (-)
Gene ID: MGYG000004680_1_14
Type: CAZyme
Location: 15704 - 17173 (-)
Gene ID: MGYG000004680_1_15
Type: TC
Location: 17157 - 17864 (-)
Gene ID: MGYG000004680_1_16
Type: TF
Location: 18032 - 18901 (-)
Gene ID: MGYG000004680_1_17
Type: CAZyme
Location: 18906 - 19781 (-)
Gene ID: MGYG000004680_1_18
Type: TF
Location: 20096 - 21706 (+)
Gene ID: MGYG000004680_1_19
Type: TC
Location: 21859 - 22830 (+)
Gene ID: MGYG000004680_1_20
Type: TC
Location: 22882 - 23907 (+)
Gene ID: MGYG000004680_1_21
Type: TC
Location: 23907 - 24938 (+)
Gene ID: MGYG000004680_1_22
Type: TC
Location: 24953 - 25750 (+)
Gene ID: MGYG000004680_1_23
Type: pfam
Location: 26220 - 26567 (+)
Gene ID: MGYG000004680_1_24
Type: TC
Location: 26807 - 28090 (+)
Gene ID: MGYG000004680_1_25
Type: pfam
Location: 28105 - 28770 (+)
Gene ID: MGYG000004680_1_26
Type: pfam
Location: 28843 - 30222 (+)
Gene ID: MGYG000004680_1_27
Type: TC
Location: 30302 - 32218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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