Cluster: MGYG000004677_CGC4
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004677
- CGC Family ID: CGCFAM_06586
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004677_9 | MGYG000004677_9_12 | 13617 | 14660 | + | 3.A.1.13.2 |
| TC | MGYG000004677_9 | MGYG000004677_9_13 | 14662 | 15780 | + | 3.A.1.14.13 |
| pfam | MGYG000004677_9 | MGYG000004677_9_14 | 15835 | 16278 | + | PrcB_C |
| pfam | MGYG000004677_9 | MGYG000004677_9_15 | 16405 | 17256 | + | ATP_bind_3 |
| CAZyme | MGYG000004677_9 | MGYG000004677_9_16 | 17318 | 18889 | + | CBM50 |
| pfam | MGYG000004677_9 | MGYG000004677_9_17 | 19201 | 19467 | + | GIY-YIG |
| peptidase | MGYG000004677_9 | MGYG000004677_9_18 | 19464 | 20981 | + | S11.UPW |
| TC | MGYG000004677_9 | MGYG000004677_9_19 | 21040 | 21696 | - | 1.C.113.1.2 |
| pfam | MGYG000004677_9 | MGYG000004677_9_20 | 21863 | 22564 | + | PseudoU_synth_2 |
| TC | MGYG000004677_9 | MGYG000004677_9_21 | 22630 | 23706 | + | 2.A.86.1.3 |
| pfam | MGYG000004677_9 | MGYG000004677_9_22 | 23809 | 24696 | + | EamA | EamA |
| TF | MGYG000004677_9 | MGYG000004677_9_23 | 24707 | 25417 | + | GntR |
| TC | MGYG000004677_9 | MGYG000004677_9_24 | 25734 | 27086 | + | 2.A.8.1.8 |
| pfam | MGYG000004677_9 | MGYG000004677_9_25 | 27195 | 28940 | + | ILVD_EDD_N | ILV_EDD_C |
| TC | MGYG000004677_9 | MGYG000004677_9_26 | 29130 | 29543 | + | 2.A.7.2.1 |
Gene ID: MGYG000004677_9_12
Type: TC
Location: 13617 - 14660 (+)
Type: TC
Location: 13617 - 14660 (+)
Gene ID: MGYG000004677_9_13
Type: TC
Location: 14662 - 15780 (+)
Type: TC
Location: 14662 - 15780 (+)
Gene ID: MGYG000004677_9_14
Type: pfam
Location: 15835 - 16278 (+)
Type: pfam
Location: 15835 - 16278 (+)
Gene ID: MGYG000004677_9_15
Type: pfam
Location: 16405 - 17256 (+)
Type: pfam
Location: 16405 - 17256 (+)
Gene ID: MGYG000004677_9_16
Type: CAZyme
Location: 17318 - 18889 (+)
Type: CAZyme
Location: 17318 - 18889 (+)
Gene ID: MGYG000004677_9_17
Type: pfam
Location: 19201 - 19467 (+)
Type: pfam
Location: 19201 - 19467 (+)
Gene ID: MGYG000004677_9_18
Type: peptidase
Location: 19464 - 20981 (+)
Type: peptidase
Location: 19464 - 20981 (+)
Gene ID: MGYG000004677_9_19
Type: TC
Location: 21040 - 21696 (-)
Type: TC
Location: 21040 - 21696 (-)
Gene ID: MGYG000004677_9_20
Type: pfam
Location: 21863 - 22564 (+)
Type: pfam
Location: 21863 - 22564 (+)
Gene ID: MGYG000004677_9_21
Type: TC
Location: 22630 - 23706 (+)
Type: TC
Location: 22630 - 23706 (+)
Gene ID: MGYG000004677_9_22
Type: pfam
Location: 23809 - 24696 (+)
Type: pfam
Location: 23809 - 24696 (+)
Gene ID: MGYG000004677_9_23
Type: TF
Location: 24707 - 25417 (+)
Type: TF
Location: 24707 - 25417 (+)
Gene ID: MGYG000004677_9_24
Type: TC
Location: 25734 - 27086 (+)
Type: TC
Location: 25734 - 27086 (+)
Gene ID: MGYG000004677_9_25
Type: pfam
Location: 27195 - 28940 (+)
Type: pfam
Location: 27195 - 28940 (+)
Gene ID: MGYG000004677_9_26
Type: TC
Location: 29130 - 29543 (+)
Type: TC
Location: 29130 - 29543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp905215775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.