Cluster: MGYG000004665_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004665
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004665_21 | MGYG000004665_21_9 | 7248 | 8108 | - | 2.A.7.5.2 |
| STP | MGYG000004665_21 | MGYG000004665_21_10 | 8278 | 9741 | - | HATPase_c | HisKA |
| TF | MGYG000004665_21 | MGYG000004665_21_11 | 9744 | 10457 | - | Trans_reg_C |
| CAZyme | MGYG000004665_21 | MGYG000004665_21_12 | 11143 | 11694 | - | CBM50 |
| pfam | MGYG000004665_21 | MGYG000004665_21_13 | 12012 | 12818 | - | S6PP | S6PP | Hydrolase_3 |
| TF | MGYG000004665_21 | MGYG000004665_21_14 | 12829 | 13269 | - | MarR |
| TC | MGYG000004665_21 | MGYG000004665_21_15 | 13273 | 15126 | - | 9.B.97.5.1 |
Gene ID: MGYG000004665_21_9
Type: TC
Location: 7248 - 8108 (-)
Type: TC
Location: 7248 - 8108 (-)
Gene ID: MGYG000004665_21_10
Type: STP
Location: 8278 - 9741 (-)
Type: STP
Location: 8278 - 9741 (-)
Gene ID: MGYG000004665_21_11
Type: TF
Location: 9744 - 10457 (-)
Type: TF
Location: 9744 - 10457 (-)
Gene ID: MGYG000004665_21_12
Type: CAZyme
Location: 11143 - 11694 (-)
Type: CAZyme
Location: 11143 - 11694 (-)
Gene ID: MGYG000004665_21_13
Type: pfam
Location: 12012 - 12818 (-)
Type: pfam
Location: 12012 - 12818 (-)
Gene ID: MGYG000004665_21_14
Type: TF
Location: 12829 - 13269 (-)
Type: TF
Location: 12829 - 13269 (-)
Gene ID: MGYG000004665_21_15
Type: TC
Location: 13273 - 15126 (-)
Type: TC
Location: 13273 - 15126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.