Cluster: MGYG000004665_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004665
- CGC Family ID: CGCFAM_00493
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004665_17 | MGYG000004665_17_5 | 2924 | 3577 | + | 9.B.18.1.2 |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_6 | 3589 | 4350 | + | GT111 |
| peptidase | MGYG000004665_17 | MGYG000004665_17_7 | 4546 | 6291 | + | C40.UPW |
| NULL(UNKNOWN) | MGYG000004665_17 | MGYG000004665_17_8 | 6338 | 6844 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_9 | 6968 | 7894 | + | GT2 |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_10 | 7915 | 8805 | + | GT2 |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_11 | 8844 | 9788 | + | GT2 |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_12 | 9902 | 10831 | + | GT2 |
| NULL(UNKNOWN) | MGYG000004665_17 | MGYG000004665_17_13 | 10831 | 12036 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004665_17 | MGYG000004665_17_14 | 12023 | 12634 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004665_17 | MGYG000004665_17_15 | 12698 | 13477 | + | GT111 |
Gene ID: MGYG000004665_17_5
Type: TC
Location: 2924 - 3577 (+)
Type: TC
Location: 2924 - 3577 (+)
Gene ID: MGYG000004665_17_6
Type: CAZyme
Location: 3589 - 4350 (+)
Type: CAZyme
Location: 3589 - 4350 (+)
Gene ID: MGYG000004665_17_7
Type: peptidase
Location: 4546 - 6291 (+)
Type: peptidase
Location: 4546 - 6291 (+)
Gene ID: MGYG000004665_17_8
Type:
Location: 6338 - 6844 (+)
Type:
Location: 6338 - 6844 (+)
Gene ID: MGYG000004665_17_9
Type: CAZyme
Location: 6968 - 7894 (+)
Type: CAZyme
Location: 6968 - 7894 (+)
Gene ID: MGYG000004665_17_10
Type: CAZyme
Location: 7915 - 8805 (+)
Type: CAZyme
Location: 7915 - 8805 (+)
Gene ID: MGYG000004665_17_11
Type: CAZyme
Location: 8844 - 9788 (+)
Type: CAZyme
Location: 8844 - 9788 (+)
Gene ID: MGYG000004665_17_12
Type: CAZyme
Location: 9902 - 10831 (+)
Type: CAZyme
Location: 9902 - 10831 (+)
Gene ID: MGYG000004665_17_13
Type:
Location: 10831 - 12036 (+)
Type:
Location: 10831 - 12036 (+)
Gene ID: MGYG000004665_17_14
Type:
Location: 12023 - 12634 (+)
Type:
Location: 12023 - 12634 (+)
Gene ID: MGYG000004665_17_15
Type: CAZyme
Location: 12698 - 13477 (+)
Type: CAZyme
Location: 12698 - 13477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.