Cluster: MGYG000004654_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004654
- CGC Family ID: CGCFAM_00185
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004654_22 | MGYG000004654_22_10 | 10695 | 12011 | - | GT2 |
| NULL(UNKNOWN) | MGYG000004654_22 | MGYG000004654_22_11 | 12399 | 12617 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004654_22 | MGYG000004654_22_12 | 13404 | 14645 | + | 3.A.1.121.4 |
Gene ID: MGYG000004654_22_10
Type: CAZyme
Location: 10695 - 12011 (-)
Type: CAZyme
Location: 10695 - 12011 (-)
Gene ID: MGYG000004654_22_11
Type:
Location: 12399 - 12617 (-)
Type:
Location: 12399 - 12617 (-)
Gene ID: MGYG000004654_22_12
Type: TC
Location: 13404 - 14645 (+)
Type: TC
Location: 13404 - 14645 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Senegalimassilia
Species
Senegalimassilia sp905215325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004654_22_12 | vegan > omnivore | 2.05262 | 0.04329 |
| MGYG000004654_22_12 | vegetarian > omnivore | 1.15567 | 0.00557 |