Cluster: MGYG000004630_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004630
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004630_5 | MGYG000004630_5_56 | 62397 | 63356 | - | GT2 |
| pfam | MGYG000004630_5 | MGYG000004630_5_57 | 63373 | 65196 | - | DUF6020 |
| CAZyme | MGYG000004630_5 | MGYG000004630_5_58 | 65236 | 67197 | - | GT2 | GT2 |
| TC | MGYG000004630_5 | MGYG000004630_5_59 | 67206 | 67955 | - | 3.A.1.103.1 |
| TC | MGYG000004630_5 | MGYG000004630_5_60 | 67965 | 68753 | - | 3.A.1.103.6 |
Gene ID: MGYG000004630_5_56
Type: CAZyme
Location: 62397 - 63356 (-)
Type: CAZyme
Location: 62397 - 63356 (-)
Gene ID: MGYG000004630_5_57
Type: pfam
Location: 63373 - 65196 (-)
Type: pfam
Location: 63373 - 65196 (-)
Gene ID: MGYG000004630_5_58
Type: CAZyme
Location: 65236 - 67197 (-)
Type: CAZyme
Location: 65236 - 67197 (-)
Gene ID: MGYG000004630_5_59
Type: TC
Location: 67206 - 67955 (-)
Type: TC
Location: 67206 - 67955 (-)
Gene ID: MGYG000004630_5_60
Type: TC
Location: 67965 - 68753 (-)
Type: TC
Location: 67965 - 68753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp944383645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004630_5_56 | vegetarian > omnivore | 1.24830 | 0.01054 |
| MGYG000004630_5_58 | vegan > omnivore | 1.36752 | 0.04425 |
| MGYG000004630_5_58 | vegetarian > omnivore | 1.81402 | 0.01054 |