Cluster: MGYG000004630_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004630
- CGC Family ID: CGCFAM_05797
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004630_2 | MGYG000004630_2_47 | 43098 | 43982 | - | GT14 |
| TF | MGYG000004630_2 | MGYG000004630_2_48 | 44051 | 44371 | - | HTH_3 |
| TC | MGYG000004630_2 | MGYG000004630_2_49 | 44930 | 46549 | + | 8.A.7.1.1 |
| STP | MGYG000004630_2 | MGYG000004630_2_50 | 46663 | 46920 | + | PTS-HPr |
| TC | MGYG000004630_2 | MGYG000004630_2_51 | 47159 | 48991 | + | 3.D.1.5.1 |
Gene ID: MGYG000004630_2_47
Type: CAZyme
Location: 43098 - 43982 (-)
Type: CAZyme
Location: 43098 - 43982 (-)
Gene ID: MGYG000004630_2_48
Type: TF
Location: 44051 - 44371 (-)
Type: TF
Location: 44051 - 44371 (-)
Gene ID: MGYG000004630_2_49
Type: TC
Location: 44930 - 46549 (+)
Type: TC
Location: 44930 - 46549 (+)
Gene ID: MGYG000004630_2_50
Type: STP
Location: 46663 - 46920 (+)
Type: STP
Location: 46663 - 46920 (+)
Gene ID: MGYG000004630_2_51
Type: TC
Location: 47159 - 48991 (+)
Type: TC
Location: 47159 - 48991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp944383645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004630_2_50 | vegetarian > omnivore | 1.04278 | 0.01054 |