Cluster: MGYG000004630_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004630
- CGC Family ID: CGCFAM_04316
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004630_82 | MGYG000004630_82_1 | 3 | 605 | + | GT26 |
| pfam | MGYG000004630_82 | MGYG000004630_82_2 | 1103 | 1717 | + | LZ_Tnp_IS66 |
| pfam | MGYG000004630_82 | MGYG000004630_82_3 | 1717 | 2103 | + | DDE_Tnp_IS66 |
| TC | MGYG000004630_82 | MGYG000004630_82_4 | 2361 | 3788 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | MGYG000004630_82 | MGYG000004630_82_5 | 4029 | 5255 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004630_82 | MGYG000004630_82_6 | 5416 | 5724 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004630_82 | MGYG000004630_82_7 | 5833 | 7899 | + | 3.A.2.2.2 |
| TC | MGYG000004630_82 | MGYG000004630_82_8 | 7902 | 8381 | + | 3.A.2.2.2 |
Gene ID: MGYG000004630_82_1
Type: CAZyme
Location: 3 - 605 (+)
Type: CAZyme
Location: 3 - 605 (+)
Gene ID: MGYG000004630_82_2
Type: pfam
Location: 1103 - 1717 (+)
Type: pfam
Location: 1103 - 1717 (+)
Gene ID: MGYG000004630_82_3
Type: pfam
Location: 1717 - 2103 (+)
Type: pfam
Location: 1717 - 2103 (+)
Gene ID: MGYG000004630_82_4
Type: TC
Location: 2361 - 3788 (-)
Type: TC
Location: 2361 - 3788 (-)
Gene ID: MGYG000004630_82_5
Type:
Location: 4029 - 5255 (+)
Type:
Location: 4029 - 5255 (+)
Gene ID: MGYG000004630_82_6
Type:
Location: 5416 - 5724 (+)
Type:
Location: 5416 - 5724 (+)
Gene ID: MGYG000004630_82_7
Type: TC
Location: 5833 - 7899 (+)
Type: TC
Location: 5833 - 7899 (+)
Gene ID: MGYG000004630_82_8
Type: TC
Location: 7902 - 8381 (+)
Type: TC
Location: 7902 - 8381 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp944383645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.