Cluster: MGYG000004630_CGC20
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004630
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004630_54 | MGYG000004630_54_11 | 10928 | 12361 | - | 2.A.50.2.1 |
| NULL(UNKNOWN) | MGYG000004630_54 | MGYG000004630_54_12 | 12358 | 13281 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004630_54 | MGYG000004630_54_13 | 13281 | 14480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004630_54 | MGYG000004630_54_14 | 14490 | 15443 | - | GT2 |
| pfam | MGYG000004630_54 | MGYG000004630_54_15 | 15490 | 16356 | - | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | MGYG000004630_54 | MGYG000004630_54_16 | 16384 | 16782 | - | DUF2304 |
| CAZyme | MGYG000004630_54 | MGYG000004630_54_17 | 16779 | 17480 | - | GT2 |
| CAZyme | MGYG000004630_54 | MGYG000004630_54_18 | 17516 | 18280 | - | GT2 |
| CAZyme | MGYG000004630_54 | MGYG000004630_54_19 | 18270 | 19490 | - | GT4 |
Gene ID: MGYG000004630_54_11
Type: TC
Location: 10928 - 12361 (-)
Type: TC
Location: 10928 - 12361 (-)
Gene ID: MGYG000004630_54_12
Type:
Location: 12358 - 13281 (-)
Type:
Location: 12358 - 13281 (-)
Gene ID: MGYG000004630_54_13
Type:
Location: 13281 - 14480 (-)
Type:
Location: 13281 - 14480 (-)
Gene ID: MGYG000004630_54_14
Type: CAZyme
Location: 14490 - 15443 (-)
Type: CAZyme
Location: 14490 - 15443 (-)
Gene ID: MGYG000004630_54_15
Type: pfam
Location: 15490 - 16356 (-)
Type: pfam
Location: 15490 - 16356 (-)
Gene ID: MGYG000004630_54_16
Type: pfam
Location: 16384 - 16782 (-)
Type: pfam
Location: 16384 - 16782 (-)
Gene ID: MGYG000004630_54_17
Type: CAZyme
Location: 16779 - 17480 (-)
Type: CAZyme
Location: 16779 - 17480 (-)
Gene ID: MGYG000004630_54_18
Type: CAZyme
Location: 17516 - 18280 (-)
Type: CAZyme
Location: 17516 - 18280 (-)
Gene ID: MGYG000004630_54_19
Type: CAZyme
Location: 18270 - 19490 (-)
Type: CAZyme
Location: 18270 - 19490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp944383645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.