dbCAN Logo

Cluster: MGYG000004623_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004623_1 MGYG000004623_1_1 42 962 + 3.A.1.1.30
TC MGYG000004623_1 MGYG000004623_1_2 976 2334 + 3.A.1.1.11
CAZyme MGYG000004623_1 MGYG000004623_1_3 2425 4065 + GH123
STP MGYG000004623_1 MGYG000004623_1_4 4100 5857 + HATPase_c | dCache_1
TF MGYG000004623_1 MGYG000004623_1_5 5832 6593 + HTH_AraC | HTH_AraC
TC MGYG000004623_1 MGYG000004623_1_6 6583 7848 + 3.A.1.1.28
TC MGYG000004623_1 MGYG000004623_1_7 8008 9288 + 3.A.1.1.47
TC MGYG000004623_1 MGYG000004623_1_8 9356 10288 + 3.A.1.1.47
TC MGYG000004623_1 MGYG000004623_1_9 10285 11142 + 3.A.1.1.47
pfam MGYG000004623_1 MGYG000004623_1_10 11160 12428 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam MGYG000004623_1 MGYG000004623_1_11 12430 13242 + NAT_N | GNAT_C
TC MGYG000004623_1 MGYG000004623_1_12 13400 14647 + 3.A.1.121.4
Gene ID: MGYG000004623_1_1
Type: TC
Location: 42 - 962 (+)
Gene ID: MGYG000004623_1_2
Type: TC
Location: 976 - 2334 (+)
Gene ID: MGYG000004623_1_3
Type: CAZyme
Location: 2425 - 4065 (+)
Gene ID: MGYG000004623_1_4
Type: STP
Location: 4100 - 5857 (+)
Gene ID: MGYG000004623_1_5
Type: TF
Location: 5832 - 6593 (+)
Gene ID: MGYG000004623_1_6
Type: TC
Location: 6583 - 7848 (+)
Gene ID: MGYG000004623_1_7
Type: TC
Location: 8008 - 9288 (+)
Gene ID: MGYG000004623_1_8
Type: TC
Location: 9356 - 10288 (+)
Gene ID: MGYG000004623_1_9
Type: TC
Location: 10285 - 11142 (+)
Gene ID: MGYG000004623_1_10
Type: pfam
Location: 11160 - 12428 (+)
Gene ID: MGYG000004623_1_11
Type: pfam
Location: 12430 - 13242 (+)
Gene ID: MGYG000004623_1_12
Type: TC
Location: 13400 - 14647 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List