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Cluster: MGYG000004621_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004621_4 MGYG000004621_4_42 37331 38314 - GH179
pfam MGYG000004621_4 MGYG000004621_4_43 38372 42763 - TamB
pfam MGYG000004621_4 MGYG000004621_4_44 42959 44308 + NQRA_N | NQRA_SLBB | NQRA_2nd
TC MGYG000004621_4 MGYG000004621_4_45 44334 45497 + 3.D.5.1.1
pfam MGYG000004621_4 MGYG000004621_4_46 45505 46122 + FMN_bind
TC MGYG000004621_4 MGYG000004621_4_47 46172 46801 + 3.D.5.1.1
TC MGYG000004621_4 MGYG000004621_4_48 46808 47434 + 3.D.5.1.1
TC MGYG000004621_4 MGYG000004621_4_49 47469 48737 + 3.D.5.1.1
pfam MGYG000004621_4 MGYG000004621_4_50 49061 49813 - CTP_transf_3 | NTP_transf_3
pfam MGYG000004621_4 MGYG000004621_4_51 49999 51102 + MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN
CAZyme MGYG000004621_4 MGYG000004621_4_52 51148 53175 + GH13_8
Gene ID: MGYG000004621_4_42
Type: CAZyme
Location: 37331 - 38314 (-)
Gene ID: MGYG000004621_4_43
Type: pfam
Location: 38372 - 42763 (-)
Gene ID: MGYG000004621_4_44
Type: pfam
Location: 42959 - 44308 (+)
Gene ID: MGYG000004621_4_45
Type: TC
Location: 44334 - 45497 (+)
Gene ID: MGYG000004621_4_46
Type: pfam
Location: 45505 - 46122 (+)
Gene ID: MGYG000004621_4_47
Type: TC
Location: 46172 - 46801 (+)
Gene ID: MGYG000004621_4_48
Type: TC
Location: 46808 - 47434 (+)
Gene ID: MGYG000004621_4_49
Type: TC
Location: 47469 - 48737 (+)
Gene ID: MGYG000004621_4_50
Type: pfam
Location: 49061 - 49813 (-)
Gene ID: MGYG000004621_4_51
Type: pfam
Location: 49999 - 51102 (+)
Gene ID: MGYG000004621_4_52
Type: CAZyme
Location: 51148 - 53175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004621_4_48 vegetarian > omnivore 1.13102 0.00411

🧭 Explore Read Mapping of CGC

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