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Cluster: MGYG000004619_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004619_3 MGYG000004619_3_141 143464 144231 - 3.A.1.103.1
TC MGYG000004619_3 MGYG000004619_3_142 144244 145089 - 3.A.1.103.6
CAZyme MGYG000004619_3 MGYG000004619_3_143 145251 146180 + GT81
CAZyme MGYG000004619_3 MGYG000004619_3_144 146212 148053 - GT2
pfam MGYG000004619_3 MGYG000004619_3_145 148086 149213 - LicD
CAZyme MGYG000004619_3 MGYG000004619_3_146 149372 151207 - GT2
Gene ID: MGYG000004619_3_141
Type: TC
Location: 143464 - 144231 (-)
Gene ID: MGYG000004619_3_142
Type: TC
Location: 144244 - 145089 (-)
Gene ID: MGYG000004619_3_143
Type: CAZyme
Location: 145251 - 146180 (+)
Gene ID: MGYG000004619_3_144
Type: CAZyme
Location: 146212 - 148053 (-)
Gene ID: MGYG000004619_3_145
Type: pfam
Location: 148086 - 149213 (-)
Gene ID: MGYG000004619_3_146
Type: CAZyme
Location: 149372 - 151207 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004619_3_142 vegan > omnivore 2.48895 0.01287
MGYG000004619_3_143 vegan > omnivore 1.71691 0.01287
MGYG000004619_3_144 vegan > omnivore 17.19672 0.01287
MGYG000004619_3_145 vegan > omnivore 17.40071 0.01287
MGYG000004619_3_146 vegan > omnivore 10.09238 0.01287

🧭 Explore Read Mapping of CGC

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