Cluster: MGYG000004607_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004607
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004607_1 | MGYG000004607_1_50 | 58557 | 61565 | + | GH2 |
| NULL(UNKNOWN) | MGYG000004607_1 | MGYG000004607_1_51 | 61569 | 62024 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004607_1 | MGYG000004607_1_52 | 62178 | 63641 | + | 2.A.3.7.4 |
| STP | MGYG000004607_1 | MGYG000004607_1_53 | 64063 | 64311 | + | PTS-HPr |
| STP | MGYG000004607_1 | MGYG000004607_1_54 | 64500 | 64742 | + | FeoA |
| TC | MGYG000004607_1 | MGYG000004607_1_55 | 64783 | 65004 | + | 9.A.8.1.6 |
| TC | MGYG000004607_1 | MGYG000004607_1_56 | 65128 | 67455 | + | 9.A.8.1.6 |
Gene ID: MGYG000004607_1_50
Type: CAZyme
Location: 58557 - 61565 (+)
Type: CAZyme
Location: 58557 - 61565 (+)
Gene ID: MGYG000004607_1_51
Type:
Location: 61569 - 62024 (+)
Type:
Location: 61569 - 62024 (+)
Gene ID: MGYG000004607_1_52
Type: TC
Location: 62178 - 63641 (+)
Type: TC
Location: 62178 - 63641 (+)
Gene ID: MGYG000004607_1_53
Type: STP
Location: 64063 - 64311 (+)
Type: STP
Location: 64063 - 64311 (+)
Gene ID: MGYG000004607_1_54
Type: STP
Location: 64500 - 64742 (+)
Type: STP
Location: 64500 - 64742 (+)
Gene ID: MGYG000004607_1_55
Type: TC
Location: 64783 - 65004 (+)
Type: TC
Location: 64783 - 65004 (+)
Gene ID: MGYG000004607_1_56
Type: TC
Location: 65128 - 67455 (+)
Type: TC
Location: 65128 - 67455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902497025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.