Cluster: MGYG000004602_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004602
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004602_26 | MGYG000004602_26_26 | 22698 | 23204 | + | 4.A.6.1.5 |
| sulfatase | MGYG000004602_26 | MGYG000004602_26_27 | 23289 | 24341 | - | S1_4 |
| TF | MGYG000004602_26 | MGYG000004602_26_28 | 24547 | 25311 | + | HTH_DeoR |
| CAZyme | MGYG000004602_26 | MGYG000004602_26_29 | 25859 | 27280 | - | GH1 |
| TC | MGYG000004602_26 | MGYG000004602_26_30 | 27357 | 29126 | - | 4.A.3.1.1 |
Gene ID: MGYG000004602_26_26
Type: TC
Location: 22698 - 23204 (+)
Type: TC
Location: 22698 - 23204 (+)
Gene ID: MGYG000004602_26_27
Type: sulfatase
Location: 23289 - 24341 (-)
Type: sulfatase
Location: 23289 - 24341 (-)
Gene ID: MGYG000004602_26_28
Type: TF
Location: 24547 - 25311 (+)
Type: TF
Location: 24547 - 25311 (+)
Gene ID: MGYG000004602_26_29
Type: CAZyme
Location: 25859 - 27280 (-)
Type: CAZyme
Location: 25859 - 27280 (-)
Gene ID: MGYG000004602_26_30
Type: TC
Location: 27357 - 29126 (-)
Type: TC
Location: 27357 - 29126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900551555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.