Cluster: MGYG000004597_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004597
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004597_40 | MGYG000004597_40_5 | 7835 | 10252 | - | 4.A.1.1.8 |
| TF | MGYG000004597_40 | MGYG000004597_40_6 | 10515 | 11234 | + | GntR |
| TC | MGYG000004597_40 | MGYG000004597_40_7 | 11541 | 12857 | + | 3.A.1.1.45 |
| TC | MGYG000004597_40 | MGYG000004597_40_8 | 12945 | 13799 | + | 3.A.1.1.45 |
| TC | MGYG000004597_40 | MGYG000004597_40_9 | 13799 | 14638 | + | 3.A.1.1.45 |
| TC | MGYG000004597_40 | MGYG000004597_40_10 | 14707 | 15906 | + | 3.A.1.1.22 |
| CAZyme | MGYG000004597_40 | MGYG000004597_40_11 | 16364 | 18631 | - | GT35 |
Gene ID: MGYG000004597_40_5
Type: TC
Location: 7835 - 10252 (-)
Type: TC
Location: 7835 - 10252 (-)
Gene ID: MGYG000004597_40_6
Type: TF
Location: 10515 - 11234 (+)
Type: TF
Location: 10515 - 11234 (+)
Gene ID: MGYG000004597_40_7
Type: TC
Location: 11541 - 12857 (+)
Type: TC
Location: 11541 - 12857 (+)
Gene ID: MGYG000004597_40_8
Type: TC
Location: 12945 - 13799 (+)
Type: TC
Location: 12945 - 13799 (+)
Gene ID: MGYG000004597_40_9
Type: TC
Location: 13799 - 14638 (+)
Type: TC
Location: 13799 - 14638 (+)
Gene ID: MGYG000004597_40_10
Type: TC
Location: 14707 - 15906 (+)
Type: TC
Location: 14707 - 15906 (+)
Gene ID: MGYG000004597_40_11
Type: CAZyme
Location: 16364 - 18631 (-)
Type: CAZyme
Location: 16364 - 18631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902496845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.