Cluster: MGYG000004588_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004588
- CGC Family ID: CGCFAM_01845
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004588_6 | MGYG000004588_6_29 | 36812 | 40210 | - | CE4 | GH18 | GT2 |
| TC | MGYG000004588_6 | MGYG000004588_6_30 | 40519 | 43704 | + | 1.B.14.6.1 |
| pfam | MGYG000004588_6 | MGYG000004588_6_31 | 43750 | 45774 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000004588_6 | MGYG000004588_6_32 | 45831 | 48638 | + | 1.B.14.6.1 |
| pfam | MGYG000004588_6 | MGYG000004588_6_33 | 48704 | 50461 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_34 | 50682 | 53687 | + | GH2 |
| TF | MGYG000004588_6 | MGYG000004588_6_35 | 53949 | 58178 | + | HTH_AraC |
| peptidase | MGYG000004588_6 | MGYG000004588_6_36 | 58175 | 60409 | - | S09.UPW |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_37 | 60489 | 63098 | - | CBM67 | GH78 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_38 | 63179 | 64714 | - | GH27 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_39 | 65124 | 67646 | + | PL11_1 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_40 | 68704 | 71265 | - | GH115 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_41 | 71291 | 72082 | - | CE12 |
| CAZyme | MGYG000004588_6 | MGYG000004588_6_42 | 72364 | 74781 | - | GH51_2 |
Gene ID: MGYG000004588_6_29
Type: CAZyme
Location: 36812 - 40210 (-)
Type: CAZyme
Location: 36812 - 40210 (-)
Gene ID: MGYG000004588_6_30
Type: TC
Location: 40519 - 43704 (+)
Type: TC
Location: 40519 - 43704 (+)
Gene ID: MGYG000004588_6_31
Type: pfam
Location: 43750 - 45774 (+)
Type: pfam
Location: 43750 - 45774 (+)
Gene ID: MGYG000004588_6_32
Type: TC
Location: 45831 - 48638 (+)
Type: TC
Location: 45831 - 48638 (+)
Gene ID: MGYG000004588_6_33
Type: pfam
Location: 48704 - 50461 (+)
Type: pfam
Location: 48704 - 50461 (+)
Gene ID: MGYG000004588_6_34
Type: CAZyme
Location: 50682 - 53687 (+)
Type: CAZyme
Location: 50682 - 53687 (+)
Gene ID: MGYG000004588_6_35
Type: TF
Location: 53949 - 58178 (+)
Type: TF
Location: 53949 - 58178 (+)
Gene ID: MGYG000004588_6_36
Type: peptidase
Location: 58175 - 60409 (-)
Type: peptidase
Location: 58175 - 60409 (-)
Gene ID: MGYG000004588_6_37
Type: CAZyme
Location: 60489 - 63098 (-)
Type: CAZyme
Location: 60489 - 63098 (-)
Gene ID: MGYG000004588_6_38
Type: CAZyme
Location: 63179 - 64714 (-)
Type: CAZyme
Location: 63179 - 64714 (-)
Gene ID: MGYG000004588_6_39
Type: CAZyme
Location: 65124 - 67646 (+)
Type: CAZyme
Location: 65124 - 67646 (+)
Gene ID: MGYG000004588_6_40
Type: CAZyme
Location: 68704 - 71265 (-)
Type: CAZyme
Location: 68704 - 71265 (-)
Gene ID: MGYG000004588_6_41
Type: CAZyme
Location: 71291 - 72082 (-)
Type: CAZyme
Location: 71291 - 72082 (-)
Gene ID: MGYG000004588_6_42
Type: CAZyme
Location: 72364 - 74781 (-)
Type: CAZyme
Location: 72364 - 74781 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900317685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.