Cluster: MGYG000004588_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004588
- CGC Family ID: CGCFAM_02281
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004588_4 | MGYG000004588_4_52 | 60936 | 64109 | + | 1.B.14.6.1 |
| pfam | MGYG000004588_4 | MGYG000004588_4_53 | 64166 | 65956 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000004588_4 | MGYG000004588_4_54 | 66005 | 67615 | + | SGBP_B_XBD |
| CAZyme | MGYG000004588_4 | MGYG000004588_4_55 | 67634 | 69133 | + | GH5_4 |
| CAZyme | MGYG000004588_4 | MGYG000004588_4_56 | 69309 | 70796 | + | CE20 |
| TC | MGYG000004588_4 | MGYG000004588_4_57 | 70919 | 72238 | - | 9.B.18.1.1 |
| TC | MGYG000004588_4 | MGYG000004588_4_58 | 72530 | 73756 | + | 9.B.156.3.1 |
Gene ID: MGYG000004588_4_52
Type: TC
Location: 60936 - 64109 (+)
Type: TC
Location: 60936 - 64109 (+)
Gene ID: MGYG000004588_4_53
Type: pfam
Location: 64166 - 65956 (+)
Type: pfam
Location: 64166 - 65956 (+)
Gene ID: MGYG000004588_4_54
Type: pfam
Location: 66005 - 67615 (+)
Type: pfam
Location: 66005 - 67615 (+)
Gene ID: MGYG000004588_4_55
Type: CAZyme
Location: 67634 - 69133 (+)
Type: CAZyme
Location: 67634 - 69133 (+)
Gene ID: MGYG000004588_4_56
Type: CAZyme
Location: 69309 - 70796 (+)
Type: CAZyme
Location: 69309 - 70796 (+)
Gene ID: MGYG000004588_4_57
Type: TC
Location: 70919 - 72238 (-)
Type: TC
Location: 70919 - 72238 (-)
Gene ID: MGYG000004588_4_58
Type: TC
Location: 72530 - 73756 (+)
Type: TC
Location: 72530 - 73756 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900317685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.