Cluster: MGYG000004588_CGC13
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004588
- CGC Family ID: CGCFAM_02542
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004588_13 | MGYG000004588_13_25 | 27875 | 30250 | + | 1.B.14.6.7 |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_26 | 30353 | 31906 | - | GH30_4 |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_27 | 31947 | 33695 | - | GH30_4 |
| sulfatase | MGYG000004588_13 | MGYG000004588_13_28 | 33854 | 35446 | - | S1_27 |
| TC | MGYG000004588_13 | MGYG000004588_13_29 | 35465 | 38488 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000004588_13 | MGYG000004588_13_30 | 38525 | 39988 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004588_13 | MGYG000004588_13_31 | 40250 | 44383 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_32 | 44424 | 47222 | - | GH2 |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_33 | 47219 | 49264 | - | GH35 |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_34 | 49309 | 51927 | - | GH2 |
| STP | MGYG000004588_13 | MGYG000004588_13_35 | 51947 | 55201 | - | TPR_2 |
| TC | MGYG000004588_13 | MGYG000004588_13_36 | 55245 | 56528 | - | 2.A.1.1.55 |
| TF | MGYG000004588_13 | MGYG000004588_13_37 | 56694 | 57620 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004588_13 | MGYG000004588_13_38 | 58357 | 59970 | - | GH27 |
Gene ID: MGYG000004588_13_25
Type: TC
Location: 27875 - 30250 (+)
Type: TC
Location: 27875 - 30250 (+)
Gene ID: MGYG000004588_13_26
Type: CAZyme
Location: 30353 - 31906 (-)
Type: CAZyme
Location: 30353 - 31906 (-)
Gene ID: MGYG000004588_13_27
Type: CAZyme
Location: 31947 - 33695 (-)
Type: CAZyme
Location: 31947 - 33695 (-)
Gene ID: MGYG000004588_13_28
Type: sulfatase
Location: 33854 - 35446 (-)
Type: sulfatase
Location: 33854 - 35446 (-)
Gene ID: MGYG000004588_13_29
Type: TC
Location: 35465 - 38488 (-)
Type: TC
Location: 35465 - 38488 (-)
Gene ID: MGYG000004588_13_30
Type:
Location: 38525 - 39988 (-)
Type:
Location: 38525 - 39988 (-)
Gene ID: MGYG000004588_13_31
Type: TF
Location: 40250 - 44383 (+)
Type: TF
Location: 40250 - 44383 (+)
Gene ID: MGYG000004588_13_32
Type: CAZyme
Location: 44424 - 47222 (-)
Type: CAZyme
Location: 44424 - 47222 (-)
Gene ID: MGYG000004588_13_33
Type: CAZyme
Location: 47219 - 49264 (-)
Type: CAZyme
Location: 47219 - 49264 (-)
Gene ID: MGYG000004588_13_34
Type: CAZyme
Location: 49309 - 51927 (-)
Type: CAZyme
Location: 49309 - 51927 (-)
Gene ID: MGYG000004588_13_35
Type: STP
Location: 51947 - 55201 (-)
Type: STP
Location: 51947 - 55201 (-)
Gene ID: MGYG000004588_13_36
Type: TC
Location: 55245 - 56528 (-)
Type: TC
Location: 55245 - 56528 (-)
Gene ID: MGYG000004588_13_37
Type: TF
Location: 56694 - 57620 (+)
Type: TF
Location: 56694 - 57620 (+)
Gene ID: MGYG000004588_13_38
Type: CAZyme
Location: 58357 - 59970 (-)
Type: CAZyme
Location: 58357 - 59970 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900317685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.