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Cluster: MGYG000004582_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004582_17 MGYG000004582_17_23 25863 26825 + GT2
CAZyme MGYG000004582_17 MGYG000004582_17_24 26822 29020 + GT2 | GT2
CAZyme MGYG000004582_17 MGYG000004582_17_25 29017 30003 + GT2
TC MGYG000004582_17 MGYG000004582_17_26 30252 31751 + 9.B.18.1.1
pfam MGYG000004582_17 MGYG000004582_17_27 31768 33528 + LytR_cpsA_psr
pfam MGYG000004582_17 MGYG000004582_17_28 33922 34878 + PBP_like | PBP_like_2 | SBP_bac_11
TC MGYG000004582_17 MGYG000004582_17_29 35046 36029 + 3.A.1.7.5
TC MGYG000004582_17 MGYG000004582_17_30 36033 36911 + 3.A.1.7.5
TC MGYG000004582_17 MGYG000004582_17_31 36981 37769 + 3.A.1.7.5
Gene ID: MGYG000004582_17_23
Type: CAZyme
Location: 25863 - 26825 (+)
Gene ID: MGYG000004582_17_24
Type: CAZyme
Location: 26822 - 29020 (+)
Gene ID: MGYG000004582_17_25
Type: CAZyme
Location: 29017 - 30003 (+)
Gene ID: MGYG000004582_17_26
Type: TC
Location: 30252 - 31751 (+)
Gene ID: MGYG000004582_17_27
Type: pfam
Location: 31768 - 33528 (+)
Gene ID: MGYG000004582_17_28
Type: pfam
Location: 33922 - 34878 (+)
Gene ID: MGYG000004582_17_29
Type: TC
Location: 35046 - 36029 (+)
Gene ID: MGYG000004582_17_30
Type: TC
Location: 36033 - 36911 (+)
Gene ID: MGYG000004582_17_31
Type: TC
Location: 36981 - 37769 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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