Cluster: MGYG000004582_CGC6
🧬 Cluster Details
- Gene Count: 31
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004582
- CGC Family ID: CGCFAM_05572
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004582_9 | MGYG000004582_9_13 | 10640 | 12139 | + | GH77 |
| TF | MGYG000004582_9 | MGYG000004582_9_14 | 12498 | 12710 | + | CSD |
| TC | MGYG000004582_9 | MGYG000004582_9_15 | 13019 | 14656 | + | 3.A.1.121.4 |
| TC | MGYG000004582_9 | MGYG000004582_9_16 | 14924 | 16282 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | MGYG000004582_9 | MGYG000004582_9_17 | 16443 | 16631 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004582_9 | MGYG000004582_9_18 | 16655 | 17209 | + | 3.A.1.25.2 |
| peptidase | MGYG000004582_9 | MGYG000004582_9_19 | 17689 | 19005 | + | M20.UND |
| TC | MGYG000004582_9 | MGYG000004582_9_20 | 19008 | 20183 | + | 3.A.1.2.17 |
| TC | MGYG000004582_9 | MGYG000004582_9_21 | 20523 | 22133 | + | 3.A.1.2.17 |
| TC | MGYG000004582_9 | MGYG000004582_9_22 | 22126 | 23172 | + | 3.A.1.2.12 |
| TC | MGYG000004582_9 | MGYG000004582_9_23 | 23176 | 24126 | + | 3.A.1.2.18 |
| pfam | MGYG000004582_9 | MGYG000004582_9_24 | 24301 | 25251 | + | A_deaminase |
| TF | MGYG000004582_9 | MGYG000004582_9_25 | 25628 | 26365 | + | 0040266 |
| TC | MGYG000004582_9 | MGYG000004582_9_26 | 26383 | 27129 | + | 3.A.1.16.1 |
| TC | MGYG000004582_9 | MGYG000004582_9_27 | 27126 | 27908 | + | 3.A.1.17.7 |
| pfam | MGYG000004582_9 | MGYG000004582_9_28 | 27983 | 28774 | + | PNP_UDP_1 |
| TC | MGYG000004582_9 | MGYG000004582_9_29 | 28930 | 30027 | + | 3.A.1.17.11 |
| TC | MGYG000004582_9 | MGYG000004582_9_30 | 30070 | 30849 | + | 3.A.1.17.7 |
| pfam | MGYG000004582_9 | MGYG000004582_9_31 | 31062 | 31817 | + | Exo_endo_phos |
| TC | MGYG000004582_9 | MGYG000004582_9_32 | 31999 | 33852 | + | 3.A.1.120.6 |
| CAZyme | MGYG000004582_9 | MGYG000004582_9_33 | 33934 | 35988 | + | GH13_11 |
| TF | MGYG000004582_9 | MGYG000004582_9_34 | 36031 | 37635 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004582_9 | MGYG000004582_9_35 | 37635 | 38411 | + | 8.A.59.2.1 |
| pfam | MGYG000004582_9 | MGYG000004582_9_36 | 38401 | 39822 | + | ABC_tran |
| pfam | MGYG000004582_9 | MGYG000004582_9_37 | 39822 | 41051 | + | Peripla_BP_4 |
| TC | MGYG000004582_9 | MGYG000004582_9_38 | 41041 | 42006 | + | 3.A.1.2.3 |
| TC | MGYG000004582_9 | MGYG000004582_9_39 | 42203 | 43882 | + | 3.A.1.5.22 |
| TC | MGYG000004582_9 | MGYG000004582_9_40 | 43970 | 44941 | + | 3.A.1.5.3 |
| TC | MGYG000004582_9 | MGYG000004582_9_41 | 44943 | 45806 | + | 3.A.1.5.15 |
| TC | MGYG000004582_9 | MGYG000004582_9_42 | 45821 | 46828 | + | 3.A.1.5.2 |
| TC | MGYG000004582_9 | MGYG000004582_9_43 | 46832 | 47782 | + | 3.A.1.5.15 |
Gene ID: MGYG000004582_9_13
Type: CAZyme
Location: 10640 - 12139 (+)
Type: CAZyme
Location: 10640 - 12139 (+)
Gene ID: MGYG000004582_9_14
Type: TF
Location: 12498 - 12710 (+)
Type: TF
Location: 12498 - 12710 (+)
Gene ID: MGYG000004582_9_15
Type: TC
Location: 13019 - 14656 (+)
Type: TC
Location: 13019 - 14656 (+)
Gene ID: MGYG000004582_9_16
Type: TC
Location: 14924 - 16282 (-)
Type: TC
Location: 14924 - 16282 (-)
Gene ID: MGYG000004582_9_17
Type:
Location: 16443 - 16631 (+)
Type:
Location: 16443 - 16631 (+)
Gene ID: MGYG000004582_9_18
Type: TC
Location: 16655 - 17209 (+)
Type: TC
Location: 16655 - 17209 (+)
Gene ID: MGYG000004582_9_19
Type: peptidase
Location: 17689 - 19005 (+)
Type: peptidase
Location: 17689 - 19005 (+)
Gene ID: MGYG000004582_9_20
Type: TC
Location: 19008 - 20183 (+)
Type: TC
Location: 19008 - 20183 (+)
Gene ID: MGYG000004582_9_21
Type: TC
Location: 20523 - 22133 (+)
Type: TC
Location: 20523 - 22133 (+)
Gene ID: MGYG000004582_9_22
Type: TC
Location: 22126 - 23172 (+)
Type: TC
Location: 22126 - 23172 (+)
Gene ID: MGYG000004582_9_23
Type: TC
Location: 23176 - 24126 (+)
Type: TC
Location: 23176 - 24126 (+)
Gene ID: MGYG000004582_9_24
Type: pfam
Location: 24301 - 25251 (+)
Type: pfam
Location: 24301 - 25251 (+)
Gene ID: MGYG000004582_9_25
Type: TF
Location: 25628 - 26365 (+)
Type: TF
Location: 25628 - 26365 (+)
Gene ID: MGYG000004582_9_26
Type: TC
Location: 26383 - 27129 (+)
Type: TC
Location: 26383 - 27129 (+)
Gene ID: MGYG000004582_9_27
Type: TC
Location: 27126 - 27908 (+)
Type: TC
Location: 27126 - 27908 (+)
Gene ID: MGYG000004582_9_28
Type: pfam
Location: 27983 - 28774 (+)
Type: pfam
Location: 27983 - 28774 (+)
Gene ID: MGYG000004582_9_29
Type: TC
Location: 28930 - 30027 (+)
Type: TC
Location: 28930 - 30027 (+)
Gene ID: MGYG000004582_9_30
Type: TC
Location: 30070 - 30849 (+)
Type: TC
Location: 30070 - 30849 (+)
Gene ID: MGYG000004582_9_31
Type: pfam
Location: 31062 - 31817 (+)
Type: pfam
Location: 31062 - 31817 (+)
Gene ID: MGYG000004582_9_32
Type: TC
Location: 31999 - 33852 (+)
Type: TC
Location: 31999 - 33852 (+)
Gene ID: MGYG000004582_9_33
Type: CAZyme
Location: 33934 - 35988 (+)
Type: CAZyme
Location: 33934 - 35988 (+)
Gene ID: MGYG000004582_9_34
Type: TF
Location: 36031 - 37635 (+)
Type: TF
Location: 36031 - 37635 (+)
Gene ID: MGYG000004582_9_35
Type: TC
Location: 37635 - 38411 (+)
Type: TC
Location: 37635 - 38411 (+)
Gene ID: MGYG000004582_9_36
Type: pfam
Location: 38401 - 39822 (+)
Type: pfam
Location: 38401 - 39822 (+)
Gene ID: MGYG000004582_9_37
Type: pfam
Location: 39822 - 41051 (+)
Type: pfam
Location: 39822 - 41051 (+)
Gene ID: MGYG000004582_9_38
Type: TC
Location: 41041 - 42006 (+)
Type: TC
Location: 41041 - 42006 (+)
Gene ID: MGYG000004582_9_39
Type: TC
Location: 42203 - 43882 (+)
Type: TC
Location: 42203 - 43882 (+)
Gene ID: MGYG000004582_9_40
Type: TC
Location: 43970 - 44941 (+)
Type: TC
Location: 43970 - 44941 (+)
Gene ID: MGYG000004582_9_41
Type: TC
Location: 44943 - 45806 (+)
Type: TC
Location: 44943 - 45806 (+)
Gene ID: MGYG000004582_9_42
Type: TC
Location: 45821 - 46828 (+)
Type: TC
Location: 45821 - 46828 (+)
Gene ID: MGYG000004582_9_43
Type: TC
Location: 46832 - 47782 (+)
Type: TC
Location: 46832 - 47782 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902496665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.