Cluster: MGYG000004563_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004563
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004563_1 | MGYG000004563_1_10 | 10166 | 11554 | - | 9.B.18.1.1 |
| CAZyme | MGYG000004563_1 | MGYG000004563_1_11 | 11642 | 12499 | - | GT2 |
| CAZyme | MGYG000004563_1 | MGYG000004563_1_12 | 12512 | 13519 | - | GT2 |
| TC | MGYG000004563_1 | MGYG000004563_1_13 | 13542 | 14285 | - | 3.A.1.103.6 |
| TC | MGYG000004563_1 | MGYG000004563_1_14 | 14316 | 15104 | - | 3.A.1.103.1 |
Gene ID: MGYG000004563_1_10
Type: TC
Location: 10166 - 11554 (-)
Type: TC
Location: 10166 - 11554 (-)
Gene ID: MGYG000004563_1_11
Type: CAZyme
Location: 11642 - 12499 (-)
Type: CAZyme
Location: 11642 - 12499 (-)
Gene ID: MGYG000004563_1_12
Type: CAZyme
Location: 12512 - 13519 (-)
Type: CAZyme
Location: 12512 - 13519 (-)
Gene ID: MGYG000004563_1_13
Type: TC
Location: 13542 - 14285 (-)
Type: TC
Location: 13542 - 14285 (-)
Gene ID: MGYG000004563_1_14
Type: TC
Location: 14316 - 15104 (-)
Type: TC
Location: 14316 - 15104 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanosphaera
Species
Methanosphaera sp900322125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.