Cluster: MGYG000004562_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004562
- CGC Family ID: CGCFAM_02818
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004562_10 | MGYG000004562_10_53 | 43742 | 45295 | + | 2.A.21.3.20 |
| CAZyme | MGYG000004562_10 | MGYG000004562_10_54 | 45446 | 46378 | + | CE7 |
| CAZyme | MGYG000004562_10 | MGYG000004562_10_55 | 46437 | 47267 | + | CE7 |
| pfam | MGYG000004562_10 | MGYG000004562_10_56 | 47441 | 47800 | + | DUF1310 |
| pfam | MGYG000004562_10 | MGYG000004562_10_57 | 47932 | 48507 | - | Thioredoxin | GSHPx | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 |
| TC | MGYG000004562_10 | MGYG000004562_10_58 | 48523 | 49251 | - | 5.A.1.2.1 |
| CAZyme | MGYG000004562_10 | MGYG000004562_10_59 | 49632 | 50552 | + | CBM50 | CBM50 |
Gene ID: MGYG000004562_10_53
Type: TC
Location: 43742 - 45295 (+)
Type: TC
Location: 43742 - 45295 (+)
Gene ID: MGYG000004562_10_54
Type: CAZyme
Location: 45446 - 46378 (+)
Type: CAZyme
Location: 45446 - 46378 (+)
Gene ID: MGYG000004562_10_55
Type: CAZyme
Location: 46437 - 47267 (+)
Type: CAZyme
Location: 46437 - 47267 (+)
Gene ID: MGYG000004562_10_56
Type: pfam
Location: 47441 - 47800 (+)
Type: pfam
Location: 47441 - 47800 (+)
Gene ID: MGYG000004562_10_57
Type: pfam
Location: 47932 - 48507 (-)
Type: pfam
Location: 47932 - 48507 (-)
Gene ID: MGYG000004562_10_58
Type: TC
Location: 48523 - 49251 (-)
Type: TC
Location: 48523 - 49251 (-)
Gene ID: MGYG000004562_10_59
Type: CAZyme
Location: 49632 - 50552 (+)
Type: CAZyme
Location: 49632 - 50552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella morbillorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.