Cluster: MGYG000004562_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004562
- CGC Family ID: CGCFAM_00029
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004562_7 | MGYG000004562_7_24 | 22483 | 24354 | + | 9.B.18.2.1 |
| TC | MGYG000004562_7 | MGYG000004562_7_25 | 24493 | 25173 | + | 9.B.18.1.3 |
| pfam | MGYG000004562_7 | MGYG000004562_7_26 | 25373 | 26590 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| CAZyme | MGYG000004562_7 | MGYG000004562_7_27 | 26644 | 27624 | + | GT2 |
| CAZyme | MGYG000004562_7 | MGYG000004562_7_28 | 27634 | 28617 | + | GT2 |
| CAZyme | MGYG000004562_7 | MGYG000004562_7_29 | 28637 | 29725 | + | GT4 |
| TC | MGYG000004562_7 | MGYG000004562_7_30 | 29748 | 30674 | + | 2.A.50.2.1 |
Gene ID: MGYG000004562_7_24
Type: TC
Location: 22483 - 24354 (+)
Type: TC
Location: 22483 - 24354 (+)
Gene ID: MGYG000004562_7_25
Type: TC
Location: 24493 - 25173 (+)
Type: TC
Location: 24493 - 25173 (+)
Gene ID: MGYG000004562_7_26
Type: pfam
Location: 25373 - 26590 (+)
Type: pfam
Location: 25373 - 26590 (+)
Gene ID: MGYG000004562_7_27
Type: CAZyme
Location: 26644 - 27624 (+)
Type: CAZyme
Location: 26644 - 27624 (+)
Gene ID: MGYG000004562_7_28
Type: CAZyme
Location: 27634 - 28617 (+)
Type: CAZyme
Location: 27634 - 28617 (+)
Gene ID: MGYG000004562_7_29
Type: CAZyme
Location: 28637 - 29725 (+)
Type: CAZyme
Location: 28637 - 29725 (+)
Gene ID: MGYG000004562_7_30
Type: TC
Location: 29748 - 30674 (+)
Type: TC
Location: 29748 - 30674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella morbillorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.