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Cluster: MGYG000004542_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004542_6 MGYG000004542_6_50 47389 49083 + 4.A.3.1.1
STP MGYG000004542_6 MGYG000004542_6_51 49246 49641 + DeoRC
pfam MGYG000004542_6 MGYG000004542_6_52 49747 50979 - Fic
CAZyme MGYG000004542_6 MGYG000004542_6_53 51348 52769 - GH1
TC MGYG000004542_6 MGYG000004542_6_54 52846 54624 - 4.A.3.1.1
TF MGYG000004542_6 MGYG000004542_6_55 54900 55910 + LacI
TC MGYG000004542_6 MGYG000004542_6_56 56164 57924 - 4.A.3.1.1
CAZyme MGYG000004542_6 MGYG000004542_6_57 58101 59543 - GH1
TF MGYG000004542_6 MGYG000004542_6_58 59885 60922 + LacI
CAZyme MGYG000004542_6 MGYG000004542_6_59 61200 62639 - GH1
TC MGYG000004542_6 MGYG000004542_6_60 62706 64466 - 4.A.3.1.1
TF MGYG000004542_6 MGYG000004542_6_61 64824 65828 + LacI
TC MGYG000004542_6 MGYG000004542_6_62 66043 66381 + 4.A.3.1.2
Gene ID: MGYG000004542_6_50
Type: TC
Location: 47389 - 49083 (+)
Gene ID: MGYG000004542_6_51
Type: STP
Location: 49246 - 49641 (+)
Gene ID: MGYG000004542_6_52
Type: pfam
Location: 49747 - 50979 (-)
Gene ID: MGYG000004542_6_53
Type: CAZyme
Location: 51348 - 52769 (-)
Gene ID: MGYG000004542_6_54
Type: TC
Location: 52846 - 54624 (-)
Gene ID: MGYG000004542_6_55
Type: TF
Location: 54900 - 55910 (+)
Gene ID: MGYG000004542_6_56
Type: TC
Location: 56164 - 57924 (-)
Gene ID: MGYG000004542_6_57
Type: CAZyme
Location: 58101 - 59543 (-)
Gene ID: MGYG000004542_6_58
Type: TF
Location: 59885 - 60922 (+)
Gene ID: MGYG000004542_6_59
Type: CAZyme
Location: 61200 - 62639 (-)
Gene ID: MGYG000004542_6_60
Type: TC
Location: 62706 - 64466 (-)
Gene ID: MGYG000004542_6_61
Type: TF
Location: 64824 - 65828 (+)
Gene ID: MGYG000004542_6_62
Type: TC
Location: 66043 - 66381 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004542_6_58 vegetarian > omnivore 1.08967 0.01276

🧭 Explore Read Mapping of CGC

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