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Cluster: MGYG000004542_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004542_6 MGYG000004542_6_1 3 695 + GH1
TC MGYG000004542_6 MGYG000004542_6_2 816 2168 + 4.A.3.2.2
TC MGYG000004542_6 MGYG000004542_6_3 2323 2625 + 4.A.3.2.9
TC MGYG000004542_6 MGYG000004542_6_4 2635 2967 + 4.A.3.2.3
STP MGYG000004542_6 MGYG000004542_6_5 3209 4162 + Glucokinase
pfam MGYG000004542_6 MGYG000004542_6_6 4290 5213 + DHH | DHHA2
TC MGYG000004542_6 MGYG000004542_6_7 5482 6840 + 2.A.33.1.1
Gene ID: MGYG000004542_6_1
Type: CAZyme
Location: 3 - 695 (+)
Gene ID: MGYG000004542_6_2
Type: TC
Location: 816 - 2168 (+)
Gene ID: MGYG000004542_6_3
Type: TC
Location: 2323 - 2625 (+)
Gene ID: MGYG000004542_6_4
Type: TC
Location: 2635 - 2967 (+)
Gene ID: MGYG000004542_6_5
Type: STP
Location: 3209 - 4162 (+)
Gene ID: MGYG000004542_6_6
Type: pfam
Location: 4290 - 5213 (+)
Gene ID: MGYG000004542_6_7
Type: TC
Location: 5482 - 6840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004542_6_3 vegan > omnivore 1.02344 0.00701

🧭 Explore Read Mapping of CGC

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