Cluster: MGYG000004542_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004542
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004542_43 | MGYG000004542_43_9 | 8776 | 9762 | - | 9.B.97.6.3 |
| TC | MGYG000004542_43 | MGYG000004542_43_10 | 9969 | 10736 | - | 3.A.1.103.1 |
| TC | MGYG000004542_43 | MGYG000004542_43_11 | 10748 | 11593 | - | 3.A.1.103.6 |
| CAZyme | MGYG000004542_43 | MGYG000004542_43_12 | 11754 | 12725 | + | GT81 |
| CAZyme | MGYG000004542_43 | MGYG000004542_43_13 | 12732 | 13700 | + | GT2 |
| TC | MGYG000004542_43 | MGYG000004542_43_14 | 13684 | 16095 | + | 9.B.144.1.5 |
Gene ID: MGYG000004542_43_9
Type: TC
Location: 8776 - 9762 (-)
Type: TC
Location: 8776 - 9762 (-)
Gene ID: MGYG000004542_43_10
Type: TC
Location: 9969 - 10736 (-)
Type: TC
Location: 9969 - 10736 (-)
Gene ID: MGYG000004542_43_11
Type: TC
Location: 10748 - 11593 (-)
Type: TC
Location: 10748 - 11593 (-)
Gene ID: MGYG000004542_43_12
Type: CAZyme
Location: 11754 - 12725 (+)
Type: CAZyme
Location: 11754 - 12725 (+)
Gene ID: MGYG000004542_43_13
Type: CAZyme
Location: 12732 - 13700 (+)
Type: CAZyme
Location: 12732 - 13700 (+)
Gene ID: MGYG000004542_43_14
Type: TC
Location: 13684 - 16095 (+)
Type: TC
Location: 13684 - 16095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902496275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.