Cluster: MGYG000004542_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004542
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004542_23 | MGYG000004542_23_9 | 12162 | 13400 | - | GH105 |
| pfam | MGYG000004542_23 | MGYG000004542_23_10 | 13508 | 14176 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000004542_23 | MGYG000004542_23_11 | 14246 | 16411 | - | CE19 | CE8 |
| peptidase | MGYG000004542_23 | MGYG000004542_23_12 | 16408 | 17217 | - | S09.UPW |
| CAZyme | MGYG000004542_23 | MGYG000004542_23_13 | 17322 | 18917 | - | GH28 |
| TC | MGYG000004542_23 | MGYG000004542_23_14 | 19033 | 20592 | - | 2.A.2.5.1 |
Gene ID: MGYG000004542_23_9
Type: CAZyme
Location: 12162 - 13400 (-)
Type: CAZyme
Location: 12162 - 13400 (-)
Gene ID: MGYG000004542_23_10
Type: pfam
Location: 13508 - 14176 (-)
Type: pfam
Location: 13508 - 14176 (-)
Gene ID: MGYG000004542_23_11
Type: CAZyme
Location: 14246 - 16411 (-)
Type: CAZyme
Location: 14246 - 16411 (-)
Gene ID: MGYG000004542_23_12
Type: peptidase
Location: 16408 - 17217 (-)
Type: peptidase
Location: 16408 - 17217 (-)
Gene ID: MGYG000004542_23_13
Type: CAZyme
Location: 17322 - 18917 (-)
Type: CAZyme
Location: 17322 - 18917 (-)
Gene ID: MGYG000004542_23_14
Type: TC
Location: 19033 - 20592 (-)
Type: TC
Location: 19033 - 20592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902496275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.