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Cluster: MGYG000004542_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004542_13 MGYG000004542_13_6 6847 7677 - 3.A.1.132.3
pfam MGYG000004542_13 MGYG000004542_13_7 7937 10816 + UvrA_DNA-bind | UvrA_inter
pfam MGYG000004542_13 MGYG000004542_13_8 10950 11450 + tRNA_edit
TC MGYG000004542_13 MGYG000004542_13_9 11454 13754 + 2.A.66.4.4
pfam MGYG000004542_13 MGYG000004542_13_10 13761 15701 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MGYG000004542_13 MGYG000004542_13_11 16067 17680 + 3.A.1.5.27
TC MGYG000004542_13 MGYG000004542_13_12 17836 18792 + 3.A.1.5.38
TC MGYG000004542_13 MGYG000004542_13_13 18796 20811 + 3.A.1.5.25
TC MGYG000004542_13 MGYG000004542_13_14 20812 21639 + 3.A.1.5.27
CAZyme MGYG000004542_13 MGYG000004542_13_15 21771 22697 + CE7
Gene ID: MGYG000004542_13_6
Type: TC
Location: 6847 - 7677 (-)
Gene ID: MGYG000004542_13_7
Type: pfam
Location: 7937 - 10816 (+)
Gene ID: MGYG000004542_13_8
Type: pfam
Location: 10950 - 11450 (+)
Gene ID: MGYG000004542_13_9
Type: TC
Location: 11454 - 13754 (+)
Gene ID: MGYG000004542_13_10
Type: pfam
Location: 13761 - 15701 (+)
Gene ID: MGYG000004542_13_11
Type: TC
Location: 16067 - 17680 (+)
Gene ID: MGYG000004542_13_12
Type: TC
Location: 17836 - 18792 (+)
Gene ID: MGYG000004542_13_13
Type: TC
Location: 18796 - 20811 (+)
Gene ID: MGYG000004542_13_14
Type: TC
Location: 20812 - 21639 (+)
Gene ID: MGYG000004542_13_15
Type: CAZyme
Location: 21771 - 22697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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