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Cluster: MGYG000004541_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004541_18 MGYG000004541_18_11 14019 15095 - GT28
pfam MGYG000004541_18 MGYG000004541_18_12 15257 16288 - Spore_GerAC
pfam MGYG000004541_18 MGYG000004541_18_13 16303 17343 - Spore_permease
TC MGYG000004541_18 MGYG000004541_18_14 17340 18767 - 9.A.11.1.2
pfam MGYG000004541_18 MGYG000004541_18_15 19199 20032 - CAP
pfam MGYG000004541_18 MGYG000004541_18_16 20266 21162 - cobW | CobW_C
TC MGYG000004541_18 MGYG000004541_18_17 21238 22734 - 9.B.174.1.1
pfam MGYG000004541_18 MGYG000004541_18_18 22858 23562 - PNP_UDP_1
pfam MGYG000004541_18 MGYG000004541_18_19 23686 23901 - YozE_SAM_like
TC MGYG000004541_18 MGYG000004541_18_20 24030 25823 + 1.B.52.2.1
pfam MGYG000004541_18 MGYG000004541_18_21 27005 28258 + Spore_permease
TC MGYG000004541_18 MGYG000004541_18_22 28262 29749 + 9.A.11.1.2
Gene ID: MGYG000004541_18_11
Type: CAZyme
Location: 14019 - 15095 (-)
Gene ID: MGYG000004541_18_12
Type: pfam
Location: 15257 - 16288 (-)
Gene ID: MGYG000004541_18_13
Type: pfam
Location: 16303 - 17343 (-)
Gene ID: MGYG000004541_18_14
Type: TC
Location: 17340 - 18767 (-)
Gene ID: MGYG000004541_18_15
Type: pfam
Location: 19199 - 20032 (-)
Gene ID: MGYG000004541_18_16
Type: pfam
Location: 20266 - 21162 (-)
Gene ID: MGYG000004541_18_17
Type: TC
Location: 21238 - 22734 (-)
Gene ID: MGYG000004541_18_18
Type: pfam
Location: 22858 - 23562 (-)
Gene ID: MGYG000004541_18_19
Type: pfam
Location: 23686 - 23901 (-)
Gene ID: MGYG000004541_18_20
Type: TC
Location: 24030 - 25823 (+)
Gene ID: MGYG000004541_18_21
Type: pfam
Location: 27005 - 28258 (+)
Gene ID: MGYG000004541_18_22
Type: TC
Location: 28262 - 29749 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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