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Cluster: MGYG000004532_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004532_8 MGYG000004532_8_17 18004 18969 + GT2
pfam MGYG000004532_8 MGYG000004532_8_18 19347 19874 + T6SS_VipA
TC MGYG000004532_8 MGYG000004532_8_19 19880 21367 + 3.A.23.2.1
TC MGYG000004532_8 MGYG000004532_8_20 21416 21946 + 3.A.23.2.1
pfam MGYG000004532_8 MGYG000004532_8_21 22117 22917 + ImpE
pfam MGYG000004532_8 MGYG000004532_8_22 23280 23783 + GPW_gp25
TC MGYG000004532_8 MGYG000004532_8_23 23792 25546 + 3.A.23.2.1
pfam MGYG000004532_8 MGYG000004532_8_24 25543 26580 + T6SS_TssG
TC MGYG000004532_8 MGYG000004532_8_25 26596 29253 + 3.A.23.2.1
Gene ID: MGYG000004532_8_17
Type: CAZyme
Location: 18004 - 18969 (+)
Gene ID: MGYG000004532_8_18
Type: pfam
Location: 19347 - 19874 (+)
Gene ID: MGYG000004532_8_19
Type: TC
Location: 19880 - 21367 (+)
Gene ID: MGYG000004532_8_20
Type: TC
Location: 21416 - 21946 (+)
Gene ID: MGYG000004532_8_21
Type: pfam
Location: 22117 - 22917 (+)
Gene ID: MGYG000004532_8_22
Type: pfam
Location: 23280 - 23783 (+)
Gene ID: MGYG000004532_8_23
Type: TC
Location: 23792 - 25546 (+)
Gene ID: MGYG000004532_8_24
Type: pfam
Location: 25543 - 26580 (+)
Gene ID: MGYG000004532_8_25
Type: TC
Location: 26596 - 29253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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